AT3G27060 (ATTSO2, TSO2)

Aliases : ATTSO2, TSO2

Description : Ferritin/ribonucleotide reductase-like family protein

Gene families : OG0001999 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001999_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G27060

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00013p00179280	ATTSO2, TSO2,...	Nucleotide metabolism.deoxynucleotide...	0.03	OrthoFinder output from all 47 species
AT3G23580	RNR2A, RNR2	ribonucleotide reductase 2A	0.04	OrthoFinder output from all 47 species
Ala_g24072	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Ala_g27950	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.02	OrthoFinder output from all 47 species
Aop_g05123	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Aop_g14647	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.05	OrthoFinder output from all 47 species
Aspi01Gene24249.t1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Cre12.g491050	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.02	OrthoFinder output from all 47 species
Dac_g09812	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Dac_g15408	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.02	OrthoFinder output from all 47 species
Dcu_g02437	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.02	OrthoFinder output from all 47 species
GSVIVT01033090001	ATTSO2, TSO2	Nucleotide metabolism.deoxynucleotide...	0.04	OrthoFinder output from all 47 species
Gb_41675	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.04	OrthoFinder output from all 47 species
LOC_Os06g03720.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
LOC_Os06g14620.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.02	OrthoFinder output from all 47 species
Len_g12992	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Msp_g11511	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.02	OrthoFinder output from all 47 species
Nbi_g12309	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Nbi_g13659	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Sam_g07065	No alias	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Sam_g07066	No alias	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species
Solyc02g094160.1.1	ATTSO2, TSO2,...	small subunit of ribonucleoside-diphosphate reductase heterodimer	0.03	OrthoFinder output from all 47 species
Spa_g09758	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.07	OrthoFinder output from all 47 species
Spa_g11227	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Spa_g11228	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.06	OrthoFinder output from all 47 species
Tin_g05900	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.04	OrthoFinder output from all 47 species
Tin_g15350	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.02	OrthoFinder output from all 47 species
Tin_g42059	ATTSO2, TSO2	small subunit of ribonucleoside-diphosphate reductase...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004748	ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	IMP	Interproscan
BP	GO:0006261	DNA-templated DNA replication	RCA	Interproscan
BP	GO:0006281	DNA repair	TAS	Interproscan
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006753	nucleoside phosphate metabolic process	None	Extended
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0007275	multicellular organism development	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008219	cell death	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009117	nucleotide metabolic process	None	Extended
BP	GO:0009132	nucleoside diphosphate metabolic process	None	Extended
BP	GO:0009165	nucleotide biosynthetic process	RCA	Interproscan
BP	GO:0009186	deoxyribonucleoside diphosphate metabolic process	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0012501	programmed cell death	IMP	Interproscan
MF	GO:0016491	oxidoreductase activity	None	Extended
MF	GO:0016725	oxidoreductase activity, acting on CH or CH2 groups	None	Extended
MF	GO:0016728	oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0019637	organophosphate metabolic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0051726	regulation of cell cycle	IMP	Interproscan
BP	GO:0055086	nucleobase-containing small molecule metabolic process	None	Extended
MF	GO:0061731	ribonucleoside-diphosphate reductase activity	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090407	organophosphate biosynthetic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901293	nucleoside phosphate biosynthetic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
CC	GO:0005730	nucleolus	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
BP	GO:0008283	cell population proliferation	IEP	HCCA
BP	GO:0009555	pollen development	IEP	HCCA
BP	GO:0009561	megagametogenesis	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010564	regulation of cell cycle process	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0042023	DNA endoreduplication	IEP	HCCA
BP	GO:0044786	cell cycle DNA replication	IEP	HCCA
BP	GO:0048229	gametophyte development	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
CC	GO:0140535	intracellular protein-containing complex	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:1901987	regulation of cell cycle phase transition	IEP	HCCA
BP	GO:1901990	regulation of mitotic cell cycle phase transition	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
CC	GO:1990234	transferase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000358	RNR_small_fam	16	283

External Links

No external refs found!

AT3G27060 (ATTSO2, TSO2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation