AT3G26932 (DRB3)

Aliases : DRB3

Description : dsRNA-binding protein 3

Gene families : OG0000404 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000404_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G26932

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00016p00199170	DRB3,...	Double-stranded RNA-binding protein 2 OS=Oryza sativa...	0.04	OrthoFinder output from all 47 species
AT1G09700	DRB1, HYL1	dsRNA-binding domain-like superfamily protein	0.04	OrthoFinder output from all 47 species
AT5G41070	DRB5	dsRNA-binding protein 5	0.01	OrthoFinder output from all 47 species
Adi_g055443	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.02	OrthoFinder output from all 47 species
Adi_g082906	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.02	OrthoFinder output from all 47 species
Als_g07433	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.02	OrthoFinder output from all 47 species
Als_g19830	DRB1, HYL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g46566	DRB1, HYL1	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0116.g046351	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.04	OrthoFinder output from all 47 species
Azfi_s0132.g049221	DRB2	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.05	OrthoFinder output from all 47 species
Azfi_s0237.g059600	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.03	OrthoFinder output from all 47 species
Cba_g57509	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.19G020000.1	DRB2, Ceric.19G020000	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.04	OrthoFinder output from all 47 species
Ceric.19G040500.1	DRB2, Ceric.19G040500	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.03	OrthoFinder output from all 47 species
Ceric.26G039500.1	DRB2, Ceric.26G039500	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.03	OrthoFinder output from all 47 species
Ehy_g07072	DRB2	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.02	OrthoFinder output from all 47 species
GSVIVT01033035001	DRB3	Double-stranded RNA-binding protein 5 OS=Arabidopsis thaliana	0.04	OrthoFinder output from all 47 species
Gb_18815	DRB2	Double-stranded RNA-binding protein 6 OS=Oryza sativa...	0.03	OrthoFinder output from all 47 species
LOC_Os09g33460.1	LOC_Os09g33460	Double-stranded RNA-binding protein 5 OS=Oryza sativa...	0.08	OrthoFinder output from all 47 species
MA_15142g0010	DRB2	Double-stranded RNA-binding protein 2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_392655g0010	No alias	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species
MA_693782g0010	DRB1, HYL1	component HYL1 of DCL1-HYL1 miRNA biogenesis complex	0.03	OrthoFinder output from all 47 species
Msp_g14654	DRB1, HYL1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g30498	DRB2	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.04	OrthoFinder output from all 47 species
Ppi_g63219	DRB2	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0021.g008465	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.03	OrthoFinder output from all 47 species
Solyc01g009190.3.1	DRB3, Solyc01g009190	Double-stranded RNA-binding protein 1 OS=Oryza sativa...	0.05	OrthoFinder output from all 47 species
Spa_g51681	DRB5	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.03	OrthoFinder output from all 47 species
Spa_g52122	DRB3	regulatory protein *(DRB2) of miRNA biogenesis pathway &...	0.05	OrthoFinder output from all 47 species
Zm00001e004552_P001	DRB2, Zm00001e004552	Double-stranded RNA-binding protein 6 OS=Oryza sativa...	0.02	OrthoFinder output from all 47 species
Zm00001e010132_P001	DRB3, Zm00001e010132	Double-stranded RNA-binding protein 5 OS=Oryza sativa...	0.06	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	None	Extended
MF	GO:0003725	double-stranded RNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006396	RNA processing	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006952	defense response	None	Extended
BP	GO:0008150	biological_process	ND	Interproscan
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009607	response to biotic stimulus	None	Extended
BP	GO:0009615	response to virus	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010267	ta-siRNA processing	RCA	Interproscan
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0030422	siRNA processing	None	Extended
BP	GO:0034470	ncRNA processing	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034660	ncRNA metabolic process	None	Extended
BP	GO:0035196	miRNA processing	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043207	response to external biotic stimulus	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044419	biological process involved in interspecies interaction between organisms	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051607	defense response to virus	RCA	Interproscan
BP	GO:0051707	response to other organism	None	Extended
BP	GO:0070918	regulatory ncRNA processing	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:0098542	defense response to other organism	None	Extended
BP	GO:0140546	defense response to symbiont	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000280	nuclear division	IEP	HCCA
BP	GO:0001708	cell fate specification	IEP	HCCA
MF	GO:0001872	(1->3)-beta-D-glucan binding	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0003677	DNA binding	IEP	HCCA
MF	GO:0003700	DNA-binding transcription factor activity	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
CC	GO:0005634	nucleus	IEP	HCCA
BP	GO:0006355	regulation of DNA-templated transcription	IEP	HCCA
BP	GO:0006473	protein acetylation	IEP	HCCA
BP	GO:0007000	nucleolus organization	IEP	HCCA
BP	GO:0007389	pattern specification process	IEP	HCCA
BP	GO:0008356	asymmetric cell division	IEP	HCCA
BP	GO:0009786	regulation of asymmetric cell division	IEP	HCCA
BP	GO:0009790	embryo development	IEP	HCCA
BP	GO:0009793	embryo development ending in seed dormancy	IEP	HCCA
BP	GO:0009889	regulation of biosynthetic process	IEP	HCCA
BP	GO:0009913	epidermal cell differentiation	IEP	HCCA
BP	GO:0009965	leaf morphogenesis	IEP	HCCA
CC	GO:0009986	cell surface	IEP	HCCA
BP	GO:0010093	specification of floral organ identity	IEP	HCCA
BP	GO:0010148	transpiration	IEP	HCCA
BP	GO:0010158	abaxial cell fate specification	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0010311	lateral root formation	IEP	HCCA
BP	GO:0010468	regulation of gene expression	IEP	HCCA
BP	GO:0010556	regulation of macromolecule biosynthetic process	IEP	HCCA
MF	GO:0016301	kinase activity	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
MF	GO:0019199	transmembrane receptor protein kinase activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
CC	GO:0030139	endocytic vesicle	IEP	HCCA
BP	GO:0030155	regulation of cell adhesion	IEP	HCCA
MF	GO:0030247	polysaccharide binding	IEP	HCCA
BP	GO:0030855	epithelial cell differentiation	IEP	HCCA
BP	GO:0031326	regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031537	regulation of anthocyanin metabolic process	IEP	HCCA
BP	GO:0031540	regulation of anthocyanin biosynthetic process	IEP	HCCA
BP	GO:0032501	multicellular organismal process	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
BP	GO:0045595	regulation of cell differentiation	IEP	HCCA
BP	GO:0045596	negative regulation of cell differentiation	IEP	HCCA
BP	GO:0048281	inflorescence morphogenesis	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048497	maintenance of floral organ identity	IEP	HCCA
BP	GO:0048507	meristem development	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048653	anther development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048827	phyllome development	IEP	HCCA
BP	GO:0048829	root cap development	IEP	HCCA
BP	GO:0050793	regulation of developmental process	IEP	HCCA
BP	GO:0050794	regulation of cellular process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051252	regulation of RNA metabolic process	IEP	HCCA
BP	GO:0051301	cell division	IEP	HCCA
BP	GO:0051302	regulation of cell division	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
BP	GO:0090700	maintenance of plant organ identity	IEP	HCCA
BP	GO:0090701	specification of plant organ identity	IEP	HCCA
BP	GO:0099402	plant organ development	IEP	HCCA
MF	GO:0140110	transcription regulator activity	IEP	HCCA
BP	GO:1903506	regulation of nucleic acid-templated transcription	IEP	HCCA
BP	GO:1905392	plant organ morphogenesis	IEP	HCCA
BP	GO:1905393	plant organ formation	IEP	HCCA
BP	GO:2000027	regulation of animal organ morphogenesis	IEP	HCCA
BP	GO:2001141	regulation of RNA biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014720	dsRBD_dom	88	150
IPR014720	dsRBD_dom	2	68

External Links

No external refs found!

AT3G26932 (DRB3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation