AT3G25980 (MAD2)

Aliases : MAD2

Description : DNA-binding HORMA family protein

Gene families : OG0006342 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006342_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G25980

Target	Alias	Description	ECC score	Gene Family Method
Adi_g010672	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.02	OrthoFinder output from all 47 species
Aev_g19678	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.04	OrthoFinder output from all 47 species
Ala_g19589	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.12	OrthoFinder output from all 47 species
Als_g12979	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.08	OrthoFinder output from all 47 species
Aop_g02412	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.08	OrthoFinder output from all 47 species
Ceric.39G059300.1	MAD2, Ceric.39G059300	spindle assembly checkpoint protein *(MAD2) & original...	0.05	OrthoFinder output from all 47 species
Cre08.g380400	MAD2	Cell cycle.mitosis and meiosis.sister chromatid...	0.03	OrthoFinder output from all 47 species
Dac_g10221	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.1	OrthoFinder output from all 47 species
Dac_g10764	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g12404	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.13	OrthoFinder output from all 47 species
GSVIVT01010325001	MAD2	Cell cycle.mitosis and meiosis.sister chromatid...	0.24	OrthoFinder output from all 47 species
Gb_04850	MAD2	MAD2 spindle assembly checkpoint protein	0.15	OrthoFinder output from all 47 species
LOC_Os04g40940.1	MAD2, LOC_Os04g40940	MAD2 spindle assembly checkpoint protein	0.11	OrthoFinder output from all 47 species
Len_g58649	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.07	OrthoFinder output from all 47 species
Lfl_g13076	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.05	OrthoFinder output from all 47 species
MA_19675g0010	MAD2	MAD2 spindle assembly checkpoint protein	0.05	OrthoFinder output from all 47 species
Mp6g18990.1	MAD2	MAD2 spindle assembly checkpoint protein	0.14	OrthoFinder output from all 47 species
Ore_g40517	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.09	OrthoFinder output from all 47 species
Sam_g11104	No alias	spindle assembly checkpoint protein *(MAD2) & original...	0.11	OrthoFinder output from all 47 species
Smo111490	MAD2	Cell cycle.mitosis and meiosis.sister chromatid...	0.03	OrthoFinder output from all 47 species
Solyc05g014370.3.1	MAD2, Solyc05g014370	MAD2 spindle assembly checkpoint protein	0.12	OrthoFinder output from all 47 species
Spa_g52388	MAD2	spindle assembly checkpoint protein *(MAD2) & original...	0.12	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000075	cell cycle checkpoint signaling	None	Extended
CC	GO:0000776	kinetochore	IDA	Interproscan
BP	GO:0001558	regulation of cell growth	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005635	nuclear envelope	IDA	Interproscan
CC	GO:0005737	cytoplasm	IDA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006260	DNA replication	None	Extended
BP	GO:0006261	DNA-templated DNA replication	None	Extended
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006511	ubiquitin-dependent protein catabolic process	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0007088	regulation of mitotic nuclear division	None	Extended
BP	GO:0007093	mitotic cell cycle checkpoint signaling	None	Extended
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	IDA	Interproscan
BP	GO:0007094	mitotic spindle assembly checkpoint signaling	ISS	Interproscan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007346	regulation of mitotic cell cycle	IMP	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008283	cell population proliferation	RCA	Interproscan
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
CC	GO:0010369	chromocenter	IDA	Interproscan
BP	GO:0010498	proteasomal protein catabolic process	None	Extended
BP	GO:0010564	regulation of cell cycle process	None	Extended
BP	GO:0010639	negative regulation of organelle organization	None	Extended
BP	GO:0010948	negative regulation of cell cycle process	None	Extended
BP	GO:0010965	regulation of mitotic sister chromatid separation	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0016572	obsolete histone phosphorylation	RCA	Interproscan
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0019941	modification-dependent protein catabolic process	None	Extended
BP	GO:0022402	cell cycle process	None	Extended
BP	GO:0022603	regulation of anatomical structure morphogenesis	None	Extended
BP	GO:0022604	regulation of cell morphogenesis	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0030071	regulation of mitotic metaphase/anaphase transition	None	Extended
BP	GO:0030163	protein catabolic process	None	Extended
BP	GO:0031577	spindle checkpoint signaling	None	Extended
CC	GO:0031967	organelle envelope	None	Extended
CC	GO:0031975	envelope	None	Extended
BP	GO:0033043	regulation of organelle organization	None	Extended
BP	GO:0033044	regulation of chromosome organization	None	Extended
BP	GO:0033045	regulation of sister chromatid segregation	None	Extended
BP	GO:0033046	negative regulation of sister chromatid segregation	None	Extended
BP	GO:0033047	regulation of mitotic sister chromatid segregation	None	Extended
BP	GO:0033048	negative regulation of mitotic sister chromatid segregation	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0035556	intracellular signal transduction	None	Extended
BP	GO:0035966	response to topologically incorrect protein	None	Extended
BP	GO:0040008	regulation of growth	None	Extended
BP	GO:0042023	DNA endoreduplication	RCA	Interproscan
BP	GO:0042221	response to chemical	None	Extended
BP	GO:0043161	proteasome-mediated ubiquitin-dependent protein catabolic process	RCA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043248	proteasome assembly	RCA	Interproscan
BP	GO:0043632	modification-dependent macromolecule catabolic process	None	Extended
BP	GO:0043933	protein-containing complex organization	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044786	cell cycle DNA replication	None	Extended
BP	GO:0045786	negative regulation of cell cycle	None	Extended
BP	GO:0045839	negative regulation of mitotic nuclear division	None	Extended
BP	GO:0045841	negative regulation of mitotic metaphase/anaphase transition	None	Extended
BP	GO:0045930	negative regulation of mitotic cell cycle	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0048638	regulation of developmental growth	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051128	regulation of cellular component organization	None	Extended
BP	GO:0051129	negative regulation of cellular component organization	None	Extended
BP	GO:0051510	regulation of unidimensional cell growth	RCA	Interproscan
BP	GO:0051603	proteolysis involved in protein catabolic process	None	Extended
BP	GO:0051726	regulation of cell cycle	None	Extended
BP	GO:0051783	regulation of nuclear division	None	Extended
BP	GO:0051784	negative regulation of nuclear division	None	Extended
BP	GO:0051788	response to misfolded protein	RCA	Interproscan
BP	GO:0051983	regulation of chromosome segregation	None	Extended
BP	GO:0051985	negative regulation of chromosome segregation	None	Extended
BP	GO:0065003	protein-containing complex assembly	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071173	spindle assembly checkpoint signaling	None	Extended
BP	GO:0071174	mitotic spindle checkpoint signaling	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0099080	supramolecular complex	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended
BP	GO:1901987	regulation of cell cycle phase transition	None	Extended
BP	GO:1901988	negative regulation of cell cycle phase transition	None	Extended
BP	GO:1901990	regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1901991	negative regulation of mitotic cell cycle phase transition	None	Extended
BP	GO:1902099	regulation of metaphase/anaphase transition of cell cycle	None	Extended
BP	GO:1902100	negative regulation of metaphase/anaphase transition of cell cycle	None	Extended
BP	GO:1903047	mitotic cell cycle process	None	Extended
BP	GO:1905818	regulation of chromosome separation	None	Extended
BP	GO:1905819	negative regulation of chromosome separation	None	Extended
BP	GO:2000816	negative regulation of mitotic sister chromatid separation	None	Extended
BP	GO:2001251	negative regulation of chromosome organization	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0000079	regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0000086	G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0000226	microtubule cytoskeleton organization	IEP	HCCA
BP	GO:0000278	mitotic cell cycle	IEP	HCCA
BP	GO:0000280	nuclear division	IEP	HCCA
CC	GO:0000307	cyclin-dependent protein kinase holoenzyme complex	IEP	HCCA
BP	GO:0000910	cytokinesis	IEP	HCCA
BP	GO:0000911	cytokinesis by cell plate formation	IEP	HCCA
BP	GO:0001932	regulation of protein phosphorylation	IEP	HCCA
BP	GO:0001933	negative regulation of protein phosphorylation	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0004672	protein kinase activity	IEP	HCCA
MF	GO:0004674	protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0004693	cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005819	spindle	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006270	DNA replication initiation	IEP	HCCA
BP	GO:0006275	regulation of DNA replication	IEP	HCCA
BP	GO:0006346	DNA methylation-dependent heterochromatin formation	IEP	HCCA
BP	GO:0006469	negative regulation of protein kinase activity	IEP	HCCA
BP	GO:0006479	protein methylation	IEP	HCCA
BP	GO:0006897	endocytosis	IEP	HCCA
BP	GO:0006996	organelle organization	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007017	microtubule-based process	IEP	HCCA
BP	GO:0007049	cell cycle	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0008213	protein alkylation	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
BP	GO:0009612	response to mechanical stimulus	IEP	HCCA
BP	GO:0009652	thigmotropism	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0009934	regulation of meristem structural organization	IEP	HCCA
BP	GO:0010376	stomatal complex formation	IEP	HCCA
BP	GO:0010389	regulation of G2/M transition of mitotic cell cycle	IEP	HCCA
BP	GO:0010440	stomatal lineage progression	IEP	HCCA
BP	GO:0010563	negative regulation of phosphorus metabolic process	IEP	HCCA
BP	GO:0010583	response to cyclopentenone	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0016458	obsolete gene silencing	IEP	HCCA
MF	GO:0016538	cyclin-dependent protein serine/threonine kinase regulator activity	IEP	HCCA
BP	GO:0016570	histone modification	IEP	HCCA
BP	GO:0016571	histone methylation	IEP	HCCA
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	IEP	HCCA
BP	GO:0018022	peptidyl-lysine methylation	IEP	HCCA
BP	GO:0018193	peptidyl-amino acid modification	IEP	HCCA
BP	GO:0018205	peptidyl-lysine modification	IEP	HCCA
MF	GO:0019207	kinase regulator activity	IEP	HCCA
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	IEP	HCCA
BP	GO:0019222	regulation of metabolic process	IEP	HCCA
MF	GO:0019887	protein kinase regulator activity	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0030865	cortical cytoskeleton organization	IEP	HCCA
BP	GO:0031048	RNA-mediated heterochromatin formation	IEP	HCCA
BP	GO:0031323	regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031400	negative regulation of protein modification process	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0033673	negative regulation of kinase activity	IEP	HCCA
BP	GO:0034968	histone lysine methylation	IEP	HCCA
BP	GO:0036211	protein modification process	IEP	HCCA
BP	GO:0042325	regulation of phosphorylation	IEP	HCCA
BP	GO:0042326	negative regulation of phosphorylation	IEP	HCCA
BP	GO:0043086	negative regulation of catalytic activity	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
BP	GO:0043412	macromolecule modification	IEP	HCCA
BP	GO:0043414	macromolecule methylation	IEP	HCCA
BP	GO:0043549	regulation of kinase activity	IEP	HCCA
BP	GO:0044092	negative regulation of molecular function	IEP	HCCA
BP	GO:0044770	cell cycle phase transition	IEP	HCCA
BP	GO:0044772	mitotic cell cycle phase transition	IEP	HCCA
BP	GO:0044839	cell cycle G2/M phase transition	IEP	HCCA
BP	GO:0045736	negative regulation of cyclin-dependent protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0045859	regulation of protein kinase activity	IEP	HCCA
BP	GO:0045936	negative regulation of phosphate metabolic process	IEP	HCCA
CC	GO:0046658	obsolete anchored component of plasma membrane	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0048285	organelle fission	IEP	HCCA
BP	GO:0048449	floral organ formation	IEP	HCCA
BP	GO:0048451	petal formation	IEP	HCCA
BP	GO:0048453	sepal formation	IEP	HCCA
BP	GO:0048646	anatomical structure formation involved in morphogenesis	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
BP	GO:0048869	cellular developmental process	IEP	HCCA
BP	GO:0051052	regulation of DNA metabolic process	IEP	HCCA
BP	GO:0051171	regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051225	spindle assembly	IEP	HCCA
BP	GO:0051248	negative regulation of protein metabolic process	IEP	HCCA
BP	GO:0051338	regulation of transferase activity	IEP	HCCA
BP	GO:0051348	negative regulation of transferase activity	IEP	HCCA
BP	GO:0051567	histone H3-K9 methylation	IEP	HCCA
BP	GO:0060255	regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0061647	histone H3-K9 modification	IEP	HCCA
CC	GO:0061695	transferase complex, transferring phosphorus-containing groups	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070925	organelle assembly	IEP	HCCA
BP	GO:0071900	regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0071901	negative regulation of protein serine/threonine kinase activity	IEP	HCCA
BP	GO:0080090	regulation of primary metabolic process	IEP	HCCA
MF	GO:0097472	cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:0140694	non-membrane-bounded organelle assembly	IEP	HCCA
BP	GO:0140718	facultative heterochromatin formation	IEP	HCCA
CC	GO:1902554	serine/threonine protein kinase complex	IEP	HCCA
BP	GO:1902749	regulation of cell cycle G2/M phase transition	IEP	HCCA
CC	GO:1902911	protein kinase complex	IEP	HCCA
BP	GO:1904029	regulation of cyclin-dependent protein kinase activity	IEP	HCCA
BP	GO:1904030	negative regulation of cyclin-dependent protein kinase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003511	HORMA_dom	17	192

External Links

No external refs found!

AT3G25980 (MAD2)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation