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  5. AT3G25600

AT3G25600


Description : Calcium-binding EF-hand family protein


Gene families : OG0002349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G25600
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Adi_g050321 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02308 No alias calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Als_g35965 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g43043 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09202 No alias Probable calcium-binding protein CML15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50180.1 LOC_Os05g50180 Probable calcium-binding protein CML14 OS=Oryza sativa... 0.07 OrthoFinder output from all 47 species
Mp1g18460.1 No alias Probable calcium-binding protein CML17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Ore_g18653 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g19092 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14864 No alias calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g010020.3.1 Solyc01g010020 Probable calcium-binding protein CML16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e032510_P001 Zm00001e032510 Probable calcium-binding protein CML14 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005794 Golgi apparatus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010200 response to chitin RCA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0007568 aging IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034976 response to endoplasmic reticulum stress IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0047262 polygalacturonate 4-alpha-galacturonosyltransferase activity IEP HCCA
BP GO:0048767 root hair elongation IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051607 defense response to virus IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
BP GO:0140546 defense response to symbiont IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 86 148
IPR002048 EF_hand_dom 11 71
No external refs found!