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AT3G25480


Description : Rhodanese/Cell cycle control phosphatase superfamily protein


Gene families : OG0003640 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003640_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G25480
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00066p00130420 evm_27.TU.AmTr_v1... Rhodanese-like domain-containing protein 4A,... 0.02 OrthoFinder output from all 47 species
Dcu_g13601 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
Ehy_g09915 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
GSVIVT01001530001 No alias Rhodanese-like domain-containing protein 4A,... 0.04 OrthoFinder output from all 47 species
Gb_07606 TROL TROL protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
Gb_23540 TROL Rhodanese-like domain-containing protein 4,... 0.04 OrthoFinder output from all 47 species
LOC_Os01g66600.1 LOC_Os01g66600 Rhodanese-like domain-containing protein 4A,... 0.03 OrthoFinder output from all 47 species
Mp5g05200.1 TROL TROL protein involved in ferredoxin-NADP oxidoreductase... 0.02 OrthoFinder output from all 47 species
Solyc10g009570.3.1 TROL, Solyc10g009570 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
Spa_g07961 TROL protein involved in ferredoxin-NADP oxidoreductase... 0.03 OrthoFinder output from all 47 species
Zm00001e028581_P003 Zm00001e028581 Rhodanese-like domain-containing protein 4A,... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009507 chloroplast ISM Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009240 isopentenyl diphosphate biosynthetic process IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016556 mRNA modification IEP HCCA
BP GO:0019288 isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway IEP HCCA
BP GO:0019682 glyceraldehyde-3-phosphate metabolic process IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
MF GO:0043495 protein-membrane adaptor activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046490 isopentenyl diphosphate metabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070453 regulation of heme biosynthetic process IEP HCCA
BP GO:0070455 positive regulation of heme biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901401 regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901403 positive regulation of tetrapyrrole metabolic process IEP HCCA
BP GO:1901463 regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901465 positive regulation of tetrapyrrole biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!