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AT3G24070


Description : Zinc knuckle (CCHC-type) family protein


Gene families : OG0009918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0009918_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G24070
Cluster HCCA: Cluster_2


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005768 endosome IEP HCCA
CC GO:0005769 early endosome IEP HCCA
CC GO:0005770 late endosome IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009690 cytokinin metabolic process IEP HCCA
BP GO:0009850 auxin metabolic process IEP HCCA
BP GO:0010091 trichome branching IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
CC GO:0015030 Cajal body IEP HCCA
MF GO:0015205 nucleobase transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015391 nucleobase:monoatomic cation symporter activity IEP HCCA
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP HCCA
CC GO:0016604 nuclear body IEP HCCA
MF GO:0019207 kinase regulator activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019887 protein kinase regulator activity IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
MF GO:0032182 ubiquitin-like protein binding IEP HCCA
CC GO:0036452 ESCRT complex IEP HCCA
BP GO:0042752 regulation of circadian rhythm IEP HCCA
MF GO:0043130 ubiquitin binding IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0051301 cell division IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080148 negative regulation of response to water deprivation IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:2000070 regulation of response to water deprivation IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 88 101
No external refs found!