Pnu_g30285


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pnu_g30285
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AT4G01030 No alias pentatricopeptide (PPR) repeat-containing protein 0.02 OrthoFinder output from all 47 species
AT4G25270 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g022355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069231 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g099319 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04672 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g07462 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g16579 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04425 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04459 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05671 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06035 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g06136 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07482 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08655 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18507 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g18767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23634 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g23735 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g55125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g05266 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14037 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g19927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g22823 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26985 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27006 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g27890 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g28242 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32957 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08782 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16849 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g23959 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g28532 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t2 Aspi01Gene49892 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0003.g007441 No alias not classified & original description: CDS=1-1959 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023864 No alias not classified & original description: CDS=1-2211 0.03 OrthoFinder output from all 47 species
Azfi_s0077.g038002 No alias not classified & original description: CDS=1-2019 0.03 OrthoFinder output from all 47 species
Azfi_s0269.g061123 No alias ssDNA-binding protein *(OSB) & original description: CDS=107-3214 0.03 OrthoFinder output from all 47 species
Azfi_s0312.g064188 No alias not classified & original description: CDS=1-2817 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.02 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.02 OrthoFinder output from all 47 species
Cba_g04086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05960 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06916 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11729 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19893 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35153 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g43844 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g45942 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g45986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66427 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g66831 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g67460 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G121800.1 Ceric.01G121800 not classified & original description: pacid=50593016... 0.02 OrthoFinder output from all 47 species
Dcu_g07457 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g09752 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g43123 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g21502 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23570 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g14557 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g14560 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g15996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g23831 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26389 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26542 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_16062 OTP84 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
Gb_36775 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os04g43430.2 LOC_Os04g43430 RNA editing factor (MEF12) 0.02 OrthoFinder output from all 47 species
LOC_Os07g15570.1 CRR2, LOC_Os07g15570 Pentatricopeptide repeat-containing protein At2g46050,... 0.02 OrthoFinder output from all 47 species
LOC_Os07g39090.1 LOC_Os07g39090 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
LOC_Os07g46770.1 LOC_Os07g46770 Pentatricopeptide repeat-containing protein At4g21065... 0.02 OrthoFinder output from all 47 species
LOC_Os12g15460.1 LOC_Os12g15460 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Len_g04352 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g12704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g19012 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g23506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26310 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_27726g0010 VAC1, ECB2, ATECB2 RNA editing factor (ECB2/VAC1) 0.02 OrthoFinder output from all 47 species
MA_356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
MA_656915g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.02 OrthoFinder output from all 47 species
MA_785826g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.02 OrthoFinder output from all 47 species
Msp_g24471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26112 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31337 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g31404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36270 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47291 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g03854 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g15698 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g16027 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g25278 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g28656 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g29069 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g33905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35296 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g01995 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02558 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02848 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03036 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g03426 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g06978 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g37149 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15292 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05927 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g07560 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g07606 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17174 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g40150 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g48074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53384 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g53559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g54901 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56584 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59317 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000500 CRR22 not classified & original description: CDS=1-1614 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005946 No alias not classified & original description: CDS=1-1029 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011787 No alias not classified & original description: CDS=98-1228 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015137 No alias not classified & original description: CDS=1-2661 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0129.g021986 No alias not classified & original description: CDS=164-3082 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0232.g026457 No alias not classified & original description: CDS=1-363 0.03 OrthoFinder output from all 47 species
Sam_g07617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09699 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g21944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g45773 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo109721 No alias Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
Solyc01g108180.4.1 Solyc01g108180 RNA editing factor (MEF8). RNA editing factor (BLX) 0.02 OrthoFinder output from all 47 species
Solyc02g068630.1.1 Solyc02g068630 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Spa_g02585 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g06116 VAC1, ECB2, ATECB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g09360 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g14323 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23620 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g28935 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g53336 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g55588 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g11187 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17320 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g26745 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g30551 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g35298 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g45488 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013166_P001 Zm00001e013166 Pentatricopeptide repeat-containing protein At4g14820... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 1 41
IPR002885 Pentatricopeptide_repeat 97 142
IPR046849 Eplus_motif 279 304
IPR032867 DYW_dom 310 359
IPR046848 E_motif 212 274
IPR002885 Pentatricopeptide_repeat 170 193
IPR002885 Pentatricopeptide_repeat 69 92
No external refs found!