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  5. AT3G21890

AT3G21890


Description : B-box type zinc finger family protein


Gene families : OG0001765 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001765_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G21890
Cluster HCCA: Cluster_78

Target Alias Description ECC score Gene Family Method Actions
Als_g04562 No alias BBX class-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G069100.1 Ceric.04G069100 BBX class-V transcription factor & original description:... 0.07 OrthoFinder output from all 47 species
GSVIVT01000440001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_14937 No alias B-box zinc finger protein 32 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os08g08120.1 LOC_Os08g08120 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g10855 No alias BBX class-V transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g053140.3.1 Solyc07g053140 transcription factor (BBX-CO) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006355 regulation of DNA-templated transcription TAS Interproscan
MF GO:0008270 zinc ion binding ISS Interproscan
BP GO:0009744 response to sucrose RCA Interproscan
BP GO:0010224 response to UV-B IEP Interproscan
BP GO:0010224 response to UV-B RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009640 photomorphogenesis IEP HCCA
BP GO:0009785 blue light signaling pathway IEP HCCA
BP GO:0009812 flavonoid metabolic process IEP HCCA
BP GO:0009813 flavonoid biosynthetic process IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010017 red or far-red light signaling pathway IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0030522 intracellular receptor signaling pathway IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071483 cellular response to blue light IEP HCCA
BP GO:0071489 cellular response to red or far red light IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA

No InterPro domains available for this sequence

No external refs found!