Aliases : PAB8, PABP8
Description : mRNA poly-A-tail binding factor *(PABP) & original description: none
Gene families : OG0000326 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000326_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Pnu_g30261 | |
Cluster | HCCA: Cluster_30 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Adi_g011275 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aop_g13336 | PAB2, PABP2, ATPAB2 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene05317.t1 | PAB2, PABP2,... | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene21814.t1 | PAB2, PABP2,... | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene47319.t1 | PAB8, PABP8,... | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g18693 | PAB3 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Len_g50808 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.03 | OrthoFinder output from all 47 species | |
Tin_g32503 | PAB8, PABP8 | mRNA poly-A-tail binding factor *(PABP) & original... | 0.04 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003723 | RNA binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0008171 | O-methyltransferase activity | IEP | HCCA |
MF | GO:0031072 | heat shock protein binding | IEP | HCCA |
MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002004 | PABP_HYD | 220 | 260 |
No external refs found! |