Heatmap: Cluster_30 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Aerial Stem
Mature Aerial Stem
Syangia
Rhizome
1.46 -0.23 -2.45 -2.23
0.94 0.23 -1.09 -1.19
Pnu_g00639 (PMDH1)
0.96 0.33 -1.51 -1.15
1.52 -0.29 -3.82 -2.07
1.18 0.05 -2.78 -0.87
0.99 0.27 -1.59 -1.09
1.33 0.23 -3.01 -2.49
1.24 0.14 -2.08 -1.76
Pnu_g01723 (DSO)
1.58 -0.34 -3.21 -3.05
1.05 0.15 -1.3 -1.27
1.0 0.28 -2.12 -0.85
1.33 0.05 -2.89 -1.68
1.1 0.2 -1.57 -1.44
1.07 0.16 -2.04 -0.9
1.15 0.4 -3.26 -1.49
1.18 0.05 -1.64 -1.39
1.22 0.11 -1.67 -1.87
1.28 0.26 -2.3 -2.54
1.35 0.28 -3.75 -2.58
1.21 0.4 -4.77 -1.6
1.01 0.39 -2.14 -1.16
1.37 -0.04 -2.16 -2.15
0.94 0.35 -1.65 -1.03
1.08 0.23 -1.88 -1.16
1.25 0.1 -1.78 -1.97
1.32 0.26 -2.43 -3.07
1.51 0.13 - -4.16
0.84 0.31 -1.3 -0.81
1.01 0.21 -1.52 -1.07
0.64 0.08 -0.55 -0.5
Pnu_g06023 (emb1075)
1.14 0.31 -4.69 -0.94
Pnu_g06072 (LHCB2)
1.76 -0.79 -7.82 -5.21
Pnu_g06111 (THFS)
1.09 0.27 -1.96 -1.29
1.48 0.16 -5.38 -3.83
Pnu_g06561 (NRT1.7)
1.35 -0.08 -2.98 -1.4
Pnu_g06607 (YLMG2)
0.96 0.41 -2.24 -0.95
Pnu_g06658 (HISN2)
0.67 0.09 -0.73 -0.43
Pnu_g06760 (CHLM)
1.19 0.23 -2.57 -1.38
Pnu_g06761 (CLA)
0.88 0.27 -1.41 -0.79
Pnu_g06898 (CLP2)
0.74 0.13 -0.89 -0.52
1.31 -0.07 -3.33 -1.09
1.02 0.36 -2.15 -1.13
Pnu_g07262 (CRR22)
1.08 0.16 -1.49 -1.28
1.08 0.35 -2.46 -1.2
1.08 0.34 -2.68 -1.1
Pnu_g07797 (FKBP13)
1.28 0.27 -2.73 -2.25
0.96 0.13 -1.17 -0.96
0.89 0.2 -1.04 -0.96
1.52 -0.08 -4.04 -2.91
0.92 0.13 -1.51 -0.59
0.96 0.37 -1.75 -1.11
0.78 0.23 -1.06 -0.67
1.08 0.19 -2.35 -0.87
1.06 0.0 -1.21 -1.06
0.82 0.14 -0.76 -0.87
0.6 0.13 -0.42 -0.63
0.86 0.22 -1.39 -0.65
Pnu_g10099 (IQD3)
1.09 0.23 -2.42 -0.96
Pnu_g10579 (GATB)
0.65 0.14 -0.59 -0.61
Pnu_g10727 (RPL4)
0.92 0.16 -0.99 -1.04
1.0 0.24 -1.67 -0.97
0.56 0.05 -0.37 -0.49
Pnu_g11457 (FTSH11)
0.65 0.06 -0.42 -0.66
0.9 0.25 -1.35 -0.85
1.1 0.13 -2.0 -0.95
1.24 0.15 -2.81 -1.38
Pnu_g11835 (ALS3)
0.81 0.18 -1.07 -0.66
1.1 0.29 -2.37 -1.2
1.31 0.17 -2.94 -1.91
Pnu_g12248 (CSD2)
1.0 0.22 -1.5 -1.06
1.06 0.13 -1.04 -1.59
1.57 -0.0 -6.12 -5.9
1.15 0.33 -2.1 -1.75
0.91 0.16 -0.98 -0.99
1.09 0.16 -1.6 -1.21
Pnu_g12787 (SQD1)
0.72 0.15 -0.77 -0.6
Pnu_g12820 (APE1)
1.21 0.21 -2.06 -1.79
Pnu_g12963 (UGT85A2)
1.27 0.12 -1.95 -2.04
1.07 0.28 -2.04 -1.2
0.92 0.37 -1.6 -1.04
Pnu_g13431 (TIC40)
0.6 0.12 -0.48 -0.54
1.14 0.4 -2.88 -1.56
Pnu_g14043 (CLPP5)
0.85 0.21 -1.05 -0.84
1.18 0.41 -3.1 -1.81
1.23 0.49 -4.72 -2.26
1.05 0.19 -1.39 -1.29
1.11 0.37 -2.4 -1.46
1.44 -0.13 -3.79 -1.73
1.35 0.13 -3.2 -1.98
0.94 0.27 -1.6 -0.87
Pnu_g17156 (CI76)
0.41 0.07 -0.44 -0.18
Pnu_g17259 (RABE1b)
0.95 0.33 -1.81 -0.94
Pnu_g17541 (CCL)
1.13 0.39 -2.57 -1.6
Pnu_g17965 (FKBP13)
1.14 0.38 -3.38 -1.32
1.28 0.11 -4.65 -1.14
1.55 -0.0 -5.97 -4.14
1.35 0.11 -3.55 -1.76
1.14 -0.12 -1.16 -1.23
Pnu_g18638 (HISN7)
1.0 0.12 -1.42 -0.91
1.2 0.23 -4.53 -1.03
Pnu_g19048 (PPDK)
1.03 0.35 -2.68 -0.91
Pnu_g19124 (emb2184)
0.73 0.17 -0.64 -0.8
Pnu_g19185 (PTR1)
1.35 -0.02 -3.15 -1.52
Pnu_g19238 (TWN3)
1.01 0.21 -1.12 -1.43
Pnu_g19415 (OVA2)
0.79 0.19 -0.91 -0.74
Pnu_g19425 (ATF1)
1.1 0.21 -1.58 -1.48
Pnu_g19992 (OMT1)
1.29 0.23 -3.57 -1.79
Pnu_g20033 (UGT85A1)
1.43 0.01 -3.05 -2.44
1.03 0.27 -1.8 -1.11
Pnu_g20898 (TOP3A)
0.52 0.04 -0.34 -0.43
Pnu_g21957 (HEME1)
0.68 0.08 -0.73 -0.46
1.05 0.15 -1.32 -1.25
1.31 -0.21 -2.38 -1.13
Pnu_g22621 (CRR22)
0.98 0.33 -1.71 -1.13
0.83 0.18 -1.36 -0.51
Pnu_g24228 (EDA3)
0.74 0.21 -0.72 -0.82
0.84 0.23 -0.96 -0.94
1.44 0.08 -3.8 -2.67
0.6 0.11 -0.59 -0.44
1.05 0.38 -2.25 -1.26
0.82 0.22 -1.22 -0.64
Pnu_g25536 (STR16)
0.89 0.3 -1.49 -0.86
Pnu_g25857 (PGP2)
1.04 0.13 -2.38 -0.61
Pnu_g26219 (WHY1)
0.63 0.16 -0.52 -0.66
Pnu_g26425 (NOL)
0.99 0.33 -1.96 -1.01
1.04 0.09 -1.19 -1.18
0.89 0.17 -0.98 -0.97
Pnu_g26589 (SPT)
0.87 0.3 -1.65 -0.67
Pnu_g26825 (PGR1)
1.12 0.39 -2.38 -1.61
1.05 0.07 -1.11 -1.29
Pnu_g27107 (HEMB1)
0.81 0.2 -1.25 -0.56
0.77 0.08 -0.99 -0.44
Pnu_g29651 (CYCD2;1)
1.38 -0.01 -2.73 -1.95
1.73 -0.63 -8.03 -4.99
1.21 -0.1 -1.56 -1.29
1.01 0.37 -2.74 -0.86
1.07 0.11 -1.5 -1.08
1.3 0.12 -3.86 -1.36
Pnu_g30261 (PAB8)
1.23 0.2 -2.6 -1.55
1.25 0.39 -3.33 -2.24
1.22 0.22 -3.2 -1.35
1.21 0.32 -2.34 -2.03
0.68 0.14 -0.53 -0.74
0.93 0.21 -1.83 -0.59
Pnu_g31061 (CYP72A9)
1.3 0.02 -1.39 -2.8
0.99 0.13 -1.07 -1.2
1.18 0.12 -2.6 -1.04
1.32 0.14 -1.82 -3.16
0.87 -0.03 -0.77 -0.72
0.96 0.16 -1.16 -1.02
1.4 0.29 -6.16 -3.02
0.71 0.01 -0.54 -0.57
Pnu_g32493 (UCC1)
1.26 0.12 -2.43 -1.6
1.11 0.2 -1.65 -1.43
1.51 -0.44 -2.6 -1.99
Pnu_g32802 (FAD4)
1.48 -0.07 -2.47 -3.75
1.28 0.12 -2.37 -1.8
0.66 0.23 -0.8 -0.58
0.87 0.06 -1.15 -0.56
1.14 0.29 -2.78 -1.22
Pnu_g33937 (DAL1)
0.62 0.15 -0.48 -0.65
1.6 -0.16 -5.9 -4.25

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.