AT3G21500 (DXPS1)

Aliases : DXPS1

Description : 1-deoxy-D-xylulose 5-phosphate synthase 1

Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G21500
Cluster	HCCA: Cluster_93

Target	Alias	Description	ECC score	Gene Family Method
Adi_g107983	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Ala_g09128	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Als_g20324	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Aob_g06658	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Aop_g04601	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Cba_g16143	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.04	OrthoFinder output from all 47 species
Cba_g22517	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.04	OrthoFinder output from all 47 species
Ceric.03G088900.1	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.05	OrthoFinder output from all 47 species
Ceric.03G098900.1	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
GSVIVT01029112001	CLA, DXS, CLA1,...	Secondary metabolism.terpenoids.methylerythritol...	0.03	OrthoFinder output from all 47 species
Gb_22616	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.06	OrthoFinder output from all 47 species
Gb_34070	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.03	OrthoFinder output from all 47 species
Gb_40956	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.02	OrthoFinder output from all 47 species
LOC_Os07g09190.1	CLA, DXS, CLA1,...	1-deoxy-D-xylulose 5-phosphate synthase (DXS)	0.05	OrthoFinder output from all 47 species
Len_g05408	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Ore_g16097	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Ore_g37260	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.04	OrthoFinder output from all 47 species
Sam_g10011	No alias	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Sam_g24724	No alias	EC_2.2 transferase transferring aldehyde or ketonic...	0.02	OrthoFinder output from all 47 species
Spa_g12625	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species
Spa_g49020	CLA, DXS, CLA1,...	EC_2.2 transferase transferring aldehyde or ketonic...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0007568	aging	RCA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	ISS	Interproscan
MF	GO:0008661	1-deoxy-D-xylulose-5-phosphate synthase activity	TAS	Interproscan
BP	GO:0009058	biosynthetic process	None	Extended
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009507	chloroplast	ISM	Interproscan
CC	GO:0009536	plastid	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016114	terpenoid biosynthetic process	ISS	Interproscan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016744	transketolase or transaldolase activity	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000162	tryptophan biosynthetic process	IEP	HCCA
MF	GO:0000257	nitrilase activity	IEP	HCCA
MF	GO:0003995	acyl-CoA dehydrogenase activity	IEP	HCCA
MF	GO:0004497	monooxygenase activity	IEP	HCCA
MF	GO:0004834	tryptophan synthase activity	IEP	HCCA
CC	GO:0005783	endoplasmic reticulum	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006714	sesquiterpenoid metabolic process	IEP	HCCA
BP	GO:0009072	aromatic amino acid metabolic process	IEP	HCCA
BP	GO:0009309	amine biosynthetic process	IEP	HCCA
BP	GO:0009608	response to symbiont	IEP	HCCA
BP	GO:0009610	response to symbiotic fungus	IEP	HCCA
BP	GO:0009625	response to insect	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
BP	GO:0009719	response to endogenous stimulus	IEP	HCCA
BP	GO:0009725	response to hormone	IEP	HCCA
BP	GO:0009753	response to jasmonic acid	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009830	cell wall modification involved in abscission	IEP	HCCA
BP	GO:0009850	auxin metabolic process	IEP	HCCA
BP	GO:0009900	dehiscence	IEP	HCCA
BP	GO:0009901	anther dehiscence	IEP	HCCA
BP	GO:0009911	positive regulation of flower development	IEP	HCCA
BP	GO:0010047	fruit dehiscence	IEP	HCCA
MF	GO:0010178	IAA-amino acid conjugate hydrolase activity	IEP	HCCA
MF	GO:0010210	IAA-Phe conjugate hydrolase activity	IEP	HCCA
MF	GO:0010211	IAA-Leu conjugate hydrolase activity	IEP	HCCA
BP	GO:0010256	endomembrane system organization	IEP	HCCA
BP	GO:0010260	obsolete animal organ senescence	IEP	HCCA
MF	GO:0010333	terpene synthase activity	IEP	HCCA
MF	GO:0010334	sesquiterpene synthase activity	IEP	HCCA
BP	GO:0016106	sesquiterpenoid biosynthetic process	IEP	HCCA
BP	GO:0016143	S-glycoside metabolic process	IEP	HCCA
MF	GO:0016491	oxidoreductase activity	IEP	HCCA
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	HCCA
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	HCCA
MF	GO:0016759	cellulose synthase activity	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016815	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in nitriles	IEP	HCCA
MF	GO:0016829	lyase activity	IEP	HCCA
MF	GO:0016835	carbon-oxygen lyase activity	IEP	HCCA
MF	GO:0016836	hydro-lyase activity	IEP	HCCA
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	IEP	HCCA
MF	GO:0018822	nitrile hydratase activity	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0019757	glycosinolate metabolic process	IEP	HCCA
BP	GO:0019759	glycosinolate catabolic process	IEP	HCCA
BP	GO:0019760	glucosinolate metabolic process	IEP	HCCA
BP	GO:0019762	glucosinolate catabolic process	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0022411	cellular component disassembly	IEP	HCCA
BP	GO:0033993	response to lipid	IEP	HCCA
MF	GO:0034768	(E)-beta-ocimene synthase activity	IEP	HCCA
BP	GO:0042343	indole glucosinolate metabolic process	IEP	HCCA
BP	GO:0042401	biogenic amine biosynthetic process	IEP	HCCA
BP	GO:0042430	indole-containing compound metabolic process	IEP	HCCA
BP	GO:0042435	indole-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042445	hormone metabolic process	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044273	sulfur compound catabolic process	IEP	HCCA
BP	GO:0044277	cell wall disassembly	IEP	HCCA
BP	GO:0045229	external encapsulating structure organization	IEP	HCCA
BP	GO:0046219	indolalkylamine biosynthetic process	IEP	HCCA
BP	GO:0046482	para-aminobenzoic acid metabolic process	IEP	HCCA
BP	GO:0046688	response to copper ion	IEP	HCCA
BP	GO:0048609	multicellular organismal reproductive process	IEP	HCCA
MF	GO:0050551	myrcene synthase activity	IEP	HCCA
BP	GO:0050898	nitrile metabolic process	IEP	HCCA
MF	GO:0052578	alpha-farnesene synthase activity	IEP	HCCA
MF	GO:0052890	oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor	IEP	HCCA
BP	GO:0070542	response to fatty acid	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0080028	nitrile biosynthetic process	IEP	HCCA
MF	GO:0080061	indole-3-acetonitrile nitrilase activity	IEP	HCCA
MF	GO:0080109	indole-3-acetonitrile nitrile hydratase activity	IEP	HCCA
BP	GO:1901657	glycosyl compound metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR033248	Transketolase_C	535	631
IPR005477	Dxylulose-5-P_synthase	275	320
IPR005477	Dxylulose-5-P_synthase	67	267
IPR005475	Transketolase-like_Pyr-bd	357	517

External Links

No external refs found!

AT3G21500 (DXPS1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation