AT3G21430 (ATALY3, ALY3)

Aliases : ATALY3, ALY3

No description available

Gene families : OG0002386 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002386_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G21430

Target	Alias	Description	ECC score	Gene Family Method
Aev_g18127	ATALY3, ALY3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g48648	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.04	OrthoFinder output from all 47 species
Aob_g13685	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.02	OrthoFinder output from all 47 species
Cre13.g570150	ATALY3, ALY3	RNA biosynthesis.transcriptional activation.MYB...	0.02	OrthoFinder output from all 47 species
Dcu_g07164	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.04	OrthoFinder output from all 47 species
GSVIVT01000089001	ATALY2, ALY2	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01017770001	ATALY3, ALY3	RNA biosynthesis.transcriptional activation.MYB...	0.05	OrthoFinder output from all 47 species
LOC_Os03g43800.1	ATALY3, ALY3,...	transcription factor (MYB-related)	0.09	OrthoFinder output from all 47 species
Len_g13957	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g02449	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.04	OrthoFinder output from all 47 species
MA_10427106g0020	No alias	no hits & (original description: none)	0.06	OrthoFinder output from all 47 species
MA_162771g0010	ATALY3, ALY3	Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_170387g0010	ATALY3, ALY3	Protein ALWAYS EARLY 3 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
MA_257780g0020	ATALY3, ALY3	transcription factor (MYB-related)	0.03	OrthoFinder output from all 47 species
Mp8g06450.1	ATALY3, ALY3	transcription factor (MYB-related)	0.05	OrthoFinder output from all 47 species
Msp_g15000	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.02	OrthoFinder output from all 47 species
Pir_g11837	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0231.g026439	ATALY3, ALY3	MYB-RELATED transcription factor *(ALY) & original...	0.03	OrthoFinder output from all 47 species
Smo420594	ATALY3, ALY3	RNA biosynthesis.transcriptional activation.MYB...	0.08	OrthoFinder output from all 47 species
Solyc01g067560.3.1	ATALY3, ALY3,...	transcription factor (MYB-related)	0.05	OrthoFinder output from all 47 species
Solyc12g098160.2.1	ATALY3, ALY3,...	transcription factor (MYB-related)	0.05	OrthoFinder output from all 47 species
Spa_g27907	ATALY3, ALY3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e041708_P001	ATALY3, ALY3,...	transcription factor (MYB-related)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009605	response to external stimulus	None	Extended
BP	GO:0009606	tropism	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009629	response to gravity	None	Extended
BP	GO:0009630	gravitropism	RCA	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010383	cell wall polysaccharide metabolic process	None	Extended
BP	GO:0010410	hemicellulose metabolic process	None	Extended
BP	GO:0010413	glucuronoxylan metabolic process	RCA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044038	cell wall macromolecule biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
BP	GO:0045491	xylan metabolic process	None	Extended
BP	GO:0045492	xylan biosynthetic process	RCA	Interproscan
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0070589	cellular component macromolecule biosynthetic process	None	Extended
BP	GO:0070592	cell wall polysaccharide biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003676	nucleic acid binding	IEP	HCCA
MF	GO:0003682	chromatin binding	IEP	HCCA
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0004402	histone acetyltransferase activity	IEP	HCCA
MF	GO:0004843	cysteine-type deubiquitinase activity	IEP	HCCA
CC	GO:0005911	cell-cell junction	IEP	HCCA
BP	GO:0006366	transcription by RNA polymerase II	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0006397	mRNA processing	IEP	HCCA
BP	GO:0006513	protein monoubiquitination	IEP	HCCA
BP	GO:0007034	vacuolar transport	IEP	HCCA
BP	GO:0007346	regulation of mitotic cell cycle	IEP	HCCA
MF	GO:0008080	N-acetyltransferase activity	IEP	HCCA
MF	GO:0008168	methyltransferase activity	IEP	HCCA
MF	GO:0008170	N-methyltransferase activity	IEP	HCCA
MF	GO:0008234	cysteine-type peptidase activity	IEP	HCCA
MF	GO:0008276	protein methyltransferase activity	IEP	HCCA
BP	GO:0008284	positive regulation of cell population proliferation	IEP	HCCA
MF	GO:0008757	S-adenosylmethionine-dependent methyltransferase activity	IEP	HCCA
BP	GO:0009292	horizontal gene transfer	IEP	HCCA
BP	GO:0009294	DNA-mediated transformation	IEP	HCCA
CC	GO:0009506	plasmodesma	IEP	HCCA
BP	GO:0010228	vegetative to reproductive phase transition of meristem	IEP	HCCA
BP	GO:0010390	histone monoubiquitination	IEP	HCCA
MF	GO:0016278	lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016279	protein-lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0016407	acetyltransferase activity	IEP	HCCA
MF	GO:0016410	N-acyltransferase activity	IEP	HCCA
BP	GO:0016567	protein ubiquitination	IEP	HCCA
BP	GO:0016574	histone ubiquitination	IEP	HCCA
MF	GO:0016747	acyltransferase activity, transferring groups other than amino-acyl groups	IEP	HCCA
MF	GO:0018024	histone lysine N-methyltransferase activity	IEP	HCCA
MF	GO:0019783	ubiquitin-like protein peptidase activity	IEP	HCCA
CC	GO:0030054	cell junction	IEP	HCCA
BP	GO:0032446	protein modification by small protein conjugation	IEP	HCCA
CC	GO:0032588	trans-Golgi network membrane	IEP	HCCA
BP	GO:0033523	histone H2B ubiquitination	IEP	HCCA
MF	GO:0034212	peptide N-acetyltransferase activity	IEP	HCCA
MF	GO:0042054	histone methyltransferase activity	IEP	HCCA
BP	GO:0042127	regulation of cell population proliferation	IEP	HCCA
MF	GO:0042800	histone H3K4 methyltransferase activity	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0043687	post-translational protein modification	IEP	HCCA
MF	GO:0046983	protein dimerization activity	IEP	HCCA
BP	GO:0048440	carpel development	IEP	HCCA
BP	GO:0048443	stamen development	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
MF	GO:0061733	peptide-lysine-N-acetyltransferase activity	IEP	HCCA
CC	GO:0070161	anchoring junction	IEP	HCCA
BP	GO:0070647	protein modification by small protein conjugation or removal	IEP	HCCA
MF	GO:0101005	deubiquitinase activity	IEP	HCCA
MF	GO:0140096	catalytic activity, acting on a protein	IEP	HCCA
MF	GO:0140938	histone H3 methyltransferase activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!

AT3G21430 (ATALY3, ALY3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation