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  5. AT3G20600

AT3G20600 (NDR1)


Aliases : NDR1

Description : Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family


Gene families : OG0018138 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0018138_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00037p00035600 NDR1,... External stimuli response.biotic stress.pathogen... 0.07 OrthoFinder output from all 47 species
AMTR_s00037p00046690 evm_27.TU.AmTr_v1... External stimuli response.biotic stress.pathogen... 0.04 OrthoFinder output from all 47 species
Aob_g25499 NDR1 regulatory protein *(NDR1) of effector-triggered... 0.03 OrthoFinder output from all 47 species
Solyc01g006320.4.1 NDR1, Solyc01g006320 NDR1 effector-triggered immunity regulator 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004871 obsolete signal transducer activity TAS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005886 plasma membrane IDA Interproscan
CC GO:0005886 plasma membrane TAS Interproscan
BP GO:0006952 defense response TAS Interproscan
BP GO:0009626 plant-type hypersensitive response IMP Interproscan
BP GO:0010942 positive regulation of cell death IMP Interproscan
CC GO:0016020 membrane ISS Interproscan
BP GO:0042742 defense response to bacterium IMP Interproscan
CC GO:0046658 obsolete anchored component of plasma membrane IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0000289 nuclear-transcribed mRNA poly(A) tail shortening IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
BP GO:0002237 response to molecule of bacterial origin IEP HCCA
BP GO:0002252 immune effector process IEP HCCA
BP GO:0002679 respiratory burst involved in defense response IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
BP GO:0009267 cellular response to starvation IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0009625 response to insect IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009692 ethylene metabolic process IEP HCCA
BP GO:0009693 ethylene biosynthetic process IEP HCCA
BP GO:0009738 abscisic acid-activated signaling pathway IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009873 ethylene-activated signaling pathway IEP HCCA
BP GO:0009962 regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0009963 positive regulation of flavonoid biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010228 vegetative to reproductive phase transition of meristem IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0031667 response to nutrient levels IEP HCCA
BP GO:0031668 cellular response to extracellular stimulus IEP HCCA
BP GO:0031669 cellular response to nutrient levels IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042594 response to starvation IEP HCCA
BP GO:0043449 cellular alkene metabolic process IEP HCCA
BP GO:0043450 alkene biosynthetic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0045730 respiratory burst IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0071496 cellular response to external stimulus IEP HCCA
BP GO:0120251 hydrocarbon biosynthetic process IEP HCCA
BP GO:0120252 hydrocarbon metabolic process IEP HCCA
BP GO:0120254 olefinic compound metabolic process IEP HCCA
BP GO:0120255 olefinic compound biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
BP GO:1900673 olefin metabolic process IEP HCCA
BP GO:1900674 olefin biosynthetic process IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA

No InterPro domains available for this sequence

No external refs found!