AT3G20520 (SVL3)

Aliases : SVL3

Description : SHV3-like 3

Gene families : OG0002387 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002387_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G20520
Cluster	HCCA: Cluster_16

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00252p00015420	SVL4,...	Glycerophosphodiester phosphodiesterase GDPDL6...	0.03	OrthoFinder output from all 47 species
AT5G58170	SVL5	SHV3-like 5	0.03	OrthoFinder output from all 47 species
Adi_g019689	SVL3	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g14503	SVL5	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01003731001	SVL5	Glycerophosphodiester phosphodiesterase GDPDL6...	0.03	OrthoFinder output from all 47 species
LOC_Os02g09450.1	SVL5, LOC_Os02g09450	Glycerophosphodiester phosphodiesterase GDPDL7...	0.04	OrthoFinder output from all 47 species
LOC_Os09g17000.1	SVL2, LOC_Os09g17000	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.03	OrthoFinder output from all 47 species
LOC_Os12g27102.1	SVL1, LOC_Os12g27102	Glycerophosphodiester phosphodiesterase GDPDL4...	0.02	OrthoFinder output from all 47 species
Lfl_g07811	SVL1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
MA_10435620g0010	SVL1	Protein SUPPRESSOR OF NPR1-1 CONSTITUTIVE 4...	0.03	OrthoFinder output from all 47 species
Solyc12g014570.2.1	SVL1, Solyc12g014570	Glycerophosphodiester phosphodiesterase GDPDL4...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005886	plasma membrane	ISM	Interproscan
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0006066	alcohol metabolic process	None	Extended
BP	GO:0006071	glycerol metabolic process	ISS	Interproscan
MF	GO:0008081	phosphoric diester hydrolase activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008889	glycerophosphodiester phosphodiesterase activity	ISS	Interproscan
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019400	alditol metabolic process	None	Extended
BP	GO:0019751	polyol metabolic process	None	Extended
CC	GO:0031225	obsolete anchored component of membrane	TAS	Interproscan
MF	GO:0042578	phosphoric ester hydrolase activity	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901615	organic hydroxy compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005215	transporter activity	IEP	HCCA
MF	GO:0005345	purine nucleobase transmembrane transporter activity	IEP	HCCA
CC	GO:0005576	extracellular region	IEP	HCCA
BP	GO:0006863	purine nucleobase transport	IEP	HCCA
BP	GO:0006885	regulation of pH	IEP	HCCA
BP	GO:0007035	vacuolar acidification	IEP	HCCA
MF	GO:0008474	palmitoyl-(protein) hydrolase activity	IEP	HCCA
BP	GO:0009698	phenylpropanoid metabolic process	IEP	HCCA
BP	GO:0009699	phenylpropanoid biosynthetic process	IEP	HCCA
BP	GO:0009886	post-embryonic animal morphogenesis	IEP	HCCA
BP	GO:0010023	proanthocyanidin biosynthetic process	IEP	HCCA
BP	GO:0010231	maintenance of seed dormancy	IEP	HCCA
MF	GO:0015205	nucleobase transmembrane transporter activity	IEP	HCCA
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015299	obsolete solute:proton antiporter activity	IEP	HCCA
MF	GO:0015399	primary active transmembrane transporter activity	IEP	HCCA
MF	GO:0015662	P-type ion transporter activity	IEP	HCCA
BP	GO:0015851	nucleobase transport	IEP	HCCA
MF	GO:0016790	thiolester hydrolase activity	IEP	HCCA
BP	GO:0018958	phenol-containing compound metabolic process	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0019900	kinase binding	IEP	HCCA
MF	GO:0019901	protein kinase binding	IEP	HCCA
MF	GO:0022804	active transmembrane transporter activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
MF	GO:0022857	transmembrane transporter activity	IEP	HCCA
BP	GO:0030641	regulation of cellular pH	IEP	HCCA
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEP	HCCA
MF	GO:0043424	protein histidine kinase binding	IEP	HCCA
BP	GO:0044550	secondary metabolite biosynthetic process	IEP	HCCA
BP	GO:0046189	phenol-containing compound biosynthetic process	IEP	HCCA
BP	GO:0048441	petal development	IEP	HCCA
BP	GO:0048445	carpel morphogenesis	IEP	HCCA
BP	GO:0051452	intracellular pH reduction	IEP	HCCA
BP	GO:0051453	regulation of intracellular pH	IEP	HCCA
BP	GO:0080154	regulation of fertilization	IEP	HCCA
BP	GO:0080155	regulation of double fertilization forming a zygote and endosperm	IEP	HCCA
BP	GO:0097437	maintenance of dormancy	IEP	HCCA
MF	GO:0098599	palmitoyl hydrolase activity	IEP	HCCA
MF	GO:0140358	P-type transmembrane transporter activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR030395	GP_PDE_dom	343	640

External Links

No external refs found!

AT3G20520 (SVL3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation