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AT3G20360


Description : TRAF-like family protein


Gene families : OG0008618 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008618_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G20360
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AT5G26300 No alias TRAF-like family protein 0.06 OrthoFinder output from all 47 species
GSVIVT01037805001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01037806001 No alias Ubiquitin carboxyl-terminal hydrolase 12 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005576 extracellular region ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0007568 aging IEP HCCA
BP GO:0010039 response to iron ion IEP HCCA
MF GO:0015562 efflux transmembrane transporter activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
BP GO:0032870 cellular response to hormone stimulus IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071241 cellular response to inorganic substance IEP HCCA
BP GO:0071248 cellular response to metal ion IEP HCCA
BP GO:0071281 cellular response to iron ion IEP HCCA
BP GO:0071310 cellular response to organic substance IEP HCCA
BP GO:0071369 cellular response to ethylene stimulus IEP HCCA
BP GO:0071495 cellular response to endogenous stimulus IEP HCCA
BP GO:0071731 response to nitric oxide IEP HCCA
BP GO:0071732 cellular response to nitric oxide IEP HCCA
BP GO:1901699 cellular response to nitrogen compound IEP HCCA
BP GO:1901701 cellular response to oxygen-containing compound IEP HCCA
BP GO:1902170 cellular response to reactive nitrogen species IEP HCCA
InterPro domains Description Start Stop
IPR002083 MATH/TRAF_dom 86 191
IPR002083 MATH/TRAF_dom 235 351
No external refs found!