AT3G19200


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G34419.1); Has 51 Blast hits to 51 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 51; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G19200

Target Alias Description ECC score Gene Family Method Actions
AT5G66800 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Als_g15808 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g40600 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g17811 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g09049 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g40338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01022142001 No alias No description available 0.03 OrthoFinder output from all 47 species
LOC_Os02g06960.1 LOC_Os02g06960 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g52490.2 LOC_Os02g52490 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os04g52800.1 LOC_Os04g52800 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os12g41660.1 LOC_Os12g41660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_391909g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g00615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g03049 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017462 No alias not classified & original description: CDS=1-2376 0.03 OrthoFinder output from all 47 species
Solyc01g108170.3.1 Solyc01g108170 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc02g090720.3.1 Solyc02g090720 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g054280.1.1 Solyc06g054280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc07g066350.1.1 Solyc07g066350 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g05577 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e009954_P001 Zm00001e009954 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e013706_P001 Zm00001e013706 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e015934_P003 Zm00001e015934 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e025161_P001 Zm00001e025161 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e034353_P001 Zm00001e034353 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0010089 xylem development RCA Interproscan
BP GO:0044036 cell wall macromolecule metabolic process RCA Interproscan
Type GO Term Name Evidence Source
BP GO:0001678 cellular glucose homeostasis IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP HCCA
MF GO:0004612 phosphoenolpyruvate carboxykinase (ATP) activity IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0030968 endoplasmic reticulum unfolded protein response IEP HCCA
BP GO:0033500 carbohydrate homeostasis IEP HCCA
BP GO:0042593 glucose homeostasis IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0071322 cellular response to carbohydrate stimulus IEP HCCA
BP GO:0071326 cellular response to monosaccharide stimulus IEP HCCA
BP GO:0071331 cellular response to hexose stimulus IEP HCCA
BP GO:0071333 cellular response to glucose stimulus IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!