1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G18450

AT3G18450


Description : PLAC8 family protein


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G18450
Cluster HCCA: Cluster_29

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00033430 evm_27.TU.AmTr_v1... Cell number regulator 10 OS=Zea mays 0.07 OrthoFinder output from all 47 species
AMTR_s00106p00154260 evm_27.TU.AmTr_v1... Cell number regulator 6 OS=Zea mays 0.04 OrthoFinder output from all 47 species
AT1G14870 PCR2 PLANT CADMIUM RESISTANCE 2 0.05 OrthoFinder output from all 47 species
AT1G14880 PCR1 PLANT CADMIUM RESISTANCE 1 0.03 OrthoFinder output from all 47 species
AT1G49030 No alias PLAC8 family protein 0.08 OrthoFinder output from all 47 species
AT1G52200 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
AT1G58320 No alias PLAC8 family protein 0.04 OrthoFinder output from all 47 species
Ceric.05G039000.1 Ceric.05G039000 not classified & original description: pacid=50578200... 0.03 OrthoFinder output from all 47 species
Ceric.07G075600.1 Ceric.07G075600 not classified & original description: pacid=50626865... 0.03 OrthoFinder output from all 47 species
Ceric.24G041000.1 Ceric.24G041000 not classified & original description: pacid=50628655... 0.03 OrthoFinder output from all 47 species
Ehy_g31096 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011694001 No alias Protein PLANT CADMIUM RESISTANCE 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01031754001 PCR2 Cell number regulator 1 OS=Zea mays 0.03 OrthoFinder output from all 47 species
Gb_02805 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os02g18540.1 LOC_Os02g18540 Protein PLANT CADMIUM RESISTANCE 4 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.08 OrthoFinder output from all 47 species
Lfl_g00571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_23074g0010 No alias Cell number regulator 1 OS=Zea mays... 0.07 OrthoFinder output from all 47 species
MA_7245g0010 PCR11 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Mp1g10640.1 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp5g01890.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g32602 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g34148 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0077.g017588 No alias not classified & original description: CDS=1-600 0.03 OrthoFinder output from all 47 species
Sam_g09559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo439474 No alias Cell number regulator 4 OS=Zea mays 0.02 OrthoFinder output from all 47 species
Solyc02g090730.3.1 PCR2, Solyc02g090730 Cell number regulator 1 OS=Zea mays... 0.06 OrthoFinder output from all 47 species
Solyc03g119660.2.1 Solyc03g119660 Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g037950.2.1 Solyc12g037950 Protein PLANT CADMIUM RESISTANCE 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e011704_P001 PCR2, Zm00001e011704 Cell number regulator 10 OS=Zea mays... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000217 DNA secondary structure binding IEP HCCA
MF GO:0003680 minor groove of adenine-thymine-rich DNA binding IEP HCCA
MF GO:0005342 organic acid transmembrane transporter activity IEP HCCA
CC GO:0005654 nucleoplasm IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0010359 regulation of anion channel activity IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0015171 amino acid transmembrane transporter activity IEP HCCA
BP GO:0022898 regulation of transmembrane transporter activity IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
BP GO:0032409 regulation of transporter activity IEP HCCA
BP GO:0032412 regulation of monoatomic ion transmembrane transporter activity IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0044070 regulation of monoatomic anion transport IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
MF GO:0046943 carboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1903959 regulation of monoatomic anion transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR006461 PLAC_motif_containing 52 149
No external refs found!