AT3G17080


Description : Plant self-incompatibility protein S1 family


Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G17080
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT1G04645 No alias Plant self-incompatibility protein S1 family 0.05 OrthoFinder output from all 47 species
AT4G16195 No alias Plant self-incompatibility protein S1 family 0.07 OrthoFinder output from all 47 species
AT4G24973 No alias Plant self-incompatibility protein S1 family 0.06 OrthoFinder output from all 47 species
GSVIVT01014872001 No alias S-protein homolog 3 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014873001 No alias S-protein homolog 2 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
GSVIVT01014874001 No alias S-protein homolog 2 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01014884001 No alias S-protein homolog 5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Pp3c16_19780V3.1 Pp3c16_19780 Plant self-incompatibility protein S1 family 0.01 OrthoFinder output from all 47 species
Pp3c21_830V3.1 Pp3c21_830 Plant self-incompatibility protein S1 family 0.02 OrthoFinder output from all 47 species
Solyc09g091310.1.1 Solyc09g091310 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc09g091350.1.1 Solyc09g091350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004871 obsolete signal transducer activity IEP HCCA
BP GO:0007267 cell-cell signaling IEP HCCA
BP GO:0010638 positive regulation of organelle organization IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
BP GO:0023052 signaling IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051130 positive regulation of cellular component organization IEP HCCA
InterPro domains Description Start Stop
IPR010264 Self-incomp_S1 28 133
No external refs found!