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Description : Plant self-incompatibility protein S1 family
Gene families : OG0007753 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007753_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT3G17080 | |
| Cluster | HCCA: Cluster_89 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04645 | No alias | Plant self-incompatibility protein S1 family | 0.05 | OrthoFinder output from all 47 species | |
| AT4G16195 | No alias | Plant self-incompatibility protein S1 family | 0.07 | OrthoFinder output from all 47 species | |
| AT4G24973 | No alias | Plant self-incompatibility protein S1 family | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01014872001 | No alias | S-protein homolog 3 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01014873001 | No alias | S-protein homolog 2 OS=Arabidopsis thaliana | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01014874001 | No alias | S-protein homolog 2 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01014884001 | No alias | S-protein homolog 5 OS=Arabidopsis thaliana | 0.04 | OrthoFinder output from all 47 species | |
| Pp3c16_19780V3.1 | Pp3c16_19780 | Plant self-incompatibility protein S1 family | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c21_830V3.1 | Pp3c21_830 | Plant self-incompatibility protein S1 family | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g091310.1.1 | Solyc09g091310 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc09g091350.1.1 | Solyc09g091350 | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | ND | Interproscan |
| CC | GO:0005576 | extracellular region | ISM | Interproscan |
| BP | GO:0008150 | biological_process | ND | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
| BP | GO:0007267 | cell-cell signaling | IEP | HCCA |
| BP | GO:0010638 | positive regulation of organelle organization | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0023052 | signaling | IEP | HCCA |
| CC | GO:0048046 | apoplast | IEP | HCCA |
| BP | GO:0051130 | positive regulation of cellular component organization | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR010264 | Self-incomp_S1 | 28 | 133 |
| No external refs found! |