AT3G13600

Description : calmodulin-binding family protein

Gene families : OG0002150 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002150_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G13600
Cluster	HCCA: Cluster_71

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01015178001	No alias	IQ domain-containing protein IQM4 OS=Arabidopsis thaliana	0.05	OrthoFinder output from all 47 species
GSVIVT01035381001	EDA39	IQ domain-containing protein IQM1 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
LOC_Os07g43970.1	LOC_Os07g43970	IQ domain-containing protein IQM2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
MA_63468g0010	No alias	IQ domain-containing protein IQM2 OS=Arabidopsis...	0.03	OrthoFinder output from all 47 species
Solyc01g005800.3.1	Solyc01g005800	IQ domain-containing protein IQM2 OS=Arabidopsis...	0.05	OrthoFinder output from all 47 species
Solyc07g040710.3.1	Solyc07g040710	IQ domain-containing protein IQM1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Solyc12g008960.2.1	Solyc12g008960	IQ domain-containing protein IQM1 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Zm00001e020488_P001	Zm00001e020488	IQ domain-containing protein IQM4 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species
Zm00001e038131_P002	Zm00001e038131	IQ domain-containing protein IQM2 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	None	Extended
MF	GO:0005516	calmodulin binding	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0008150	biological_process	ND	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA

No InterPro domains available for this sequence

External Links

No external refs found!