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AT3G13070


Description : CBS domain-containing protein / transporter associated domain-containing protein


Gene families : OG0003877 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003877_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G13070
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00055p00196140 evm_27.TU.AmTr_v1... Putative DUF21 domain-containing protein At3g13070,... 0.03 OrthoFinder output from all 47 species
Cba_g12565 No alias magnesium cation transporter *(MGR) & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.18G030900.1 Ceric.18G030900 magnesium cation transporter *(MGR) & original... 0.03 OrthoFinder output from all 47 species
Mp4g09150.1 No alias DUF21 domain-containing protein At1g55930, chloroplastic... 0.03 OrthoFinder output from all 47 species
Ppi_g55549 No alias magnesium cation transporter *(MGR) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g35508 No alias magnesium cation transporter *(MGR) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g065310.3.1 Solyc07g065310 Putative DUF21 domain-containing protein At3g13070,... 0.03 OrthoFinder output from all 47 species
Zm00001e004956_P001 Zm00001e004956 DUF21 domain-containing protein At1g55930, chloroplastic... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005886 plasma membrane ISM Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
InterPro domains Description Start Stop
IPR002550 CNNM 163 340
IPR005170 Transptr-assoc_dom 500 604
IPR000644 CBS_dom 423 478
IPR000644 CBS_dom 355 413
No external refs found!