AT3G12820 (MYB10, AtMYB10)

Aliases : MYB10, AtMYB10

Description : myb domain protein 10

Gene families : OG0000015 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G12820

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00024p00224850	MYB3, ATMYB3,...	RNA biosynthesis.transcriptional activation.MYB...	0.06	OrthoFinder output from all 47 species
AT4G34990	MYB32, AtMYB32	myb domain protein 32	0.03	OrthoFinder output from all 47 species
AT5G26660	MYB86, ATMYB86	myb domain protein 86	0.04	OrthoFinder output from all 47 species
Aop_g07218	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.03	OrthoFinder output from all 47 species
Aspi01Gene11648.t1	AtMYB17, MYB17,...	MYB class-R2R3 subgroup-2 transcription factor &...	0.02	OrthoFinder output from all 47 species
Aspi01Gene15104.t1	MYB103,...	transcriptional regulator *(MS188) & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0035.g025508	ATMYB46, MYB46	not classified & original description: CDS=479-1312	0.03	OrthoFinder output from all 47 species
Cba_g71217	ATMYB101, MYB101, ATM1	MYB class-R2R3 subgroup-18 transcription factor &...	0.05	OrthoFinder output from all 47 species
Dcu_g09375	ATMYB4, MYB4	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g21227	AtMYB17, MYB17	accessory protein (LMI2) of floral meristem identity...	0.03	OrthoFinder output from all 47 species
Dde_g47604	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g14947	ATMIXTA, MYB16, ATMYB16	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ehy_g16481	MYB3, ATMYB3	not classified & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01015264001	MYB36, AtMYB36	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
GSVIVT01023531001	ATMYB15, ATY19, MYB15	RNA biosynthesis.transcriptional activation.MYB...	0.09	OrthoFinder output from all 47 species
Gb_05115	ATMIXTA, MYB16, ATMYB16	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Gb_24035	MYB103, AtMYB103	transcription factor (MYB)	0.08	OrthoFinder output from all 47 species
Gb_26833	ATMYB61, MYB61	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Gb_35539	MYB103, AtMYB103	transcription factor (MYB)	0.06	OrthoFinder output from all 47 species
LOC_Os01g45090.1	MYB24, AtMYB24,...	transcription factor (MYB)	0.05	OrthoFinder output from all 47 species
Len_g38471	ATMIXTA, MYB16, ATMYB16	MYB class-R2R3 subgroup-8 transcription factor &...	0.03	OrthoFinder output from all 47 species
MA_10432903g0010	ATMYB4, MYB4	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
MA_117992g0010	AtMYB112, MYB112	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
MA_1850812g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
MA_323706g0010	MYB3, ATMYB3	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
MA_34517g0010	AtMYB83, MYB83	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
Msp_g20533	ATMYB120, MYB120	MYB class-R2R3 subgroup-18 transcription factor &...	0.03	OrthoFinder output from all 47 species
Nbi_g02787	ATMYB61, MYB61	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g06162	ATMYB61, MYB61	MYB class-R2R3 subgroup-13 transcription factor &...	0.02	OrthoFinder output from all 47 species
Pp3c6_9970V3.1	Pp3c6_9970	myb domain protein 106	0.01	OrthoFinder output from all 47 species
Sam_g03569	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Solyc05g008250.2.1	MYB3, ATMYB3,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Solyc06g005310.3.1	ATMYB48-1,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Zm00001e009849_P001	MYB36, AtMYB36,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e019941_P001	MYB37, RAX1,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Zm00001e023100_P001	MYB19, AtMYB19,...	transcription factor (MYB)	0.04	OrthoFinder output from all 47 species
Zm00001e034214_P001	MYB36, AtMYB36,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	16	63
IPR001005	SANT/Myb	69	114

External Links

No external refs found!

AT3G12820 (MYB10, AtMYB10)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation