Aliases : TRFL9, ATTBP2
Description : TRF-like 9
Gene families : OG0001380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001380_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: AT3G12560 | |
Cluster | HCCA: Cluster_82 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Pir_g25384 | TRFL2 | telomeric dsDNA-binding protein & original description: none | 0.05 | OrthoFinder output from all 47 species | |
Sam_g12040 | No alias | telomeric dsDNA-binding protein & original description: none | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006007 | glucose catabolic process | RCA | Interproscan |
MF | GO:0008301 | DNA binding, bending | IDA | Interproscan |
BP | GO:0009737 | response to abscisic acid | IEP | Interproscan |
MF | GO:0042162 | telomeric DNA binding | IDA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003774 | cytoskeletal motor activity | IEP | HCCA |
MF | GO:0003777 | microtubule motor activity | IEP | HCCA |
MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
MF | GO:0005509 | calcium ion binding | IEP | HCCA |
MF | GO:0008289 | lipid binding | IEP | HCCA |
BP | GO:0009606 | tropism | IEP | HCCA |
BP | GO:0009629 | response to gravity | IEP | HCCA |
BP | GO:0009630 | gravitropism | IEP | HCCA |
BP | GO:0009890 | negative regulation of biosynthetic process | IEP | HCCA |
BP | GO:0009958 | positive gravitropism | IEP | HCCA |
BP | GO:0010558 | negative regulation of macromolecule biosynthetic process | IEP | HCCA |
MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
BP | GO:0030243 | cellulose metabolic process | IEP | HCCA |
BP | GO:0030244 | cellulose biosynthetic process | IEP | HCCA |
BP | GO:0031324 | negative regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031327 | negative regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0031965 | nuclear membrane | IEP | HCCA |
CC | GO:0042175 | nuclear outer membrane-endoplasmic reticulum membrane network | IEP | HCCA |
BP | GO:0045892 | negative regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045934 | negative regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0051172 | negative regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051253 | negative regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051273 | beta-glucan metabolic process | IEP | HCCA |
BP | GO:0051274 | beta-glucan biosynthetic process | IEP | HCCA |
BP | GO:1902679 | negative regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903507 | negative regulation of nucleic acid-templated transcription | IEP | HCCA |
No InterPro domains available for this sequence
No external refs found! |