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  5. AT3G11560

AT3G11560


Description : LETM1-like protein


Gene families : OG0002186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11560
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00114p00128980 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aop_g21243 No alias MADS/AGL-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.02G026100.1 Ceric.02G026100 not classified & original description: pacid=50585185... 0.03 OrthoFinder output from all 47 species
Dcu_g01930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025245 No alias solute transporter *(TPPT) & original description: CDS=295-3090 0.02 OrthoFinder output from all 47 species
Solyc09g010280.3.1 Solyc09g010280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009941 chloroplast envelope IDA Interproscan
BP GO:0010075 regulation of meristem growth RCA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004331 fructose-2,6-bisphosphate 2-phosphatase activity IEP HCCA
MF GO:0004760 serine-pyruvate transaminase activity IEP HCCA
MF GO:0005351 carbohydrate:proton symporter activity IEP HCCA
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
MF GO:0005402 carbohydrate:monoatomic cation symporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006002 fructose 6-phosphate metabolic process IEP HCCA
BP GO:0006003 fructose 2,6-bisphosphate metabolic process IEP HCCA
BP GO:0006655 phosphatidylglycerol biosynthetic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008453 alanine-glyoxylate transaminase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
CC GO:0009532 plastid stroma IEP HCCA
CC GO:0009543 chloroplast thylakoid lumen IEP HCCA
CC GO:0009570 chloroplast stroma IEP HCCA
BP GO:0009636 response to toxic substance IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015662 P-type ion transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019203 carbohydrate phosphatase activity IEP HCCA
BP GO:0019321 pentose metabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
CC GO:0031969 chloroplast membrane IEP HCCA
CC GO:0031977 thylakoid lumen IEP HCCA
CC GO:0031978 plastid thylakoid lumen IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
CC GO:0042170 plastid membrane IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0042732 D-xylose metabolic process IEP HCCA
BP GO:0043609 regulation of carbon utilization IEP HCCA
BP GO:0046471 phosphatidylglycerol metabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
MF GO:0050281 serine-glyoxylate transaminase activity IEP HCCA
MF GO:0050308 sugar-phosphatase activity IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
MF GO:0140358 P-type transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!