AT3G11230


Description : Yippee family putative zinc-binding protein


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G11230
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AT2G40110 No alias Yippee family putative zinc-binding protein 0.04 OrthoFinder output from all 47 species
Ala_g23069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12330 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os11g35020.2 LOC_Os11g35020 Protein yippee-like At4g27745 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Lfl_g30441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp4g11690.1 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Ore_g06930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
BP GO:0000394 RNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004557 alpha-galactosidase activity IEP HCCA
BP GO:0006388 tRNA splicing, via endonucleolytic cleavage and ligation IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
BP GO:0006665 sphingolipid metabolic process IEP HCCA
BP GO:0006672 ceramide metabolic process IEP HCCA
BP GO:0006677 glycosylceramide metabolic process IEP HCCA
BP GO:0006687 glycosphingolipid metabolic process IEP HCCA
BP GO:0006825 copper ion transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
MF GO:0015925 galactosidase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016137 glycoside metabolic process IEP HCCA
BP GO:0016139 glycoside catabolic process IEP HCCA
MF GO:0016530 metallochaperone activity IEP HCCA
MF GO:0016531 copper chaperone activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
BP GO:0019377 glycolipid catabolic process IEP HCCA
BP GO:0030149 sphingolipid catabolic process IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
BP GO:0046477 glycosylceramide catabolic process IEP HCCA
BP GO:0046479 glycosphingolipid catabolic process IEP HCCA
BP GO:0046514 ceramide catabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
BP GO:1901658 glycosyl compound catabolic process IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 14 104
No external refs found!