AT3G10760

Description : Homeodomain-like superfamily protein

Gene families : OG0000124 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000124_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G10760

Target	Alias	Description	ECC score	Gene Family Method
Adi_g054623	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g25103	LUX, PCL1	component *(LUX) of circadian clock Evening complex (EC)...	0.03	OrthoFinder output from all 47 species
Aspi01Gene31778.t2	RR12, ARR12,...	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene69302.t1	LUX, PCL1,...	component *(LUX) of circadian clock Evening complex (EC)...	0.02	OrthoFinder output from all 47 species
Azfi_s0110.g045439	No alias	not classified & original description: CDS=1-1449	0.03	OrthoFinder output from all 47 species
Cba_g13893	ARR11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000984.19	MYBC1	No description available	0.01	OrthoFinder output from all 47 species
Cre05.g243000	ARR1, RR1	RNA biosynthesis.transcriptional activation.ARR-B...	0.02	OrthoFinder output from all 47 species
Dde_g12820	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g05928	RR12, ARR12	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g06166	ARR1, RR1	subgroup ARR-B transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Gb_37200	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
LOC_Os06g08440.1	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species
Lfl_g26067	ARR11	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
MA_9051g0010	ARR1, RR1	B-type cytokinin ARR response activator. transcription...	0.04	OrthoFinder output from all 47 species
Msp_g15114	MYBC1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g21083	ARR11	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ore_g21173	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g49826	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011863	MYBC1	not classified & original description: CDS=1-1491	0.03	OrthoFinder output from all 47 species
Solyc01g065540.3.1	ARR1, RR1, Solyc01g065540	B-type cytokinin ARR response activator. transcription...	0.05	OrthoFinder output from all 47 species
Spa_g22337	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g51591	ARR10, RR10	subgroup ARR-B transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e016123_P001	RR12, ARR12,...	B-type cytokinin ARR response activator. transcription...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000041	transition metal ion transport	IEP	HCCA
MF	GO:0004559	alpha-mannosidase activity	IEP	HCCA
MF	GO:0004721	phosphoprotein phosphatase activity	IEP	HCCA
MF	GO:0004722	protein serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0004723	calcium-dependent protein serine/threonine phosphatase activity	IEP	HCCA
MF	GO:0005375	copper ion transmembrane transporter activity	IEP	HCCA
MF	GO:0005509	calcium ion binding	IEP	HCCA
CC	GO:0005618	cell wall	IEP	HCCA
CC	GO:0005768	endosome	IEP	HCCA
CC	GO:0005770	late endosome	IEP	HCCA
CC	GO:0005773	vacuole	IEP	HCCA
CC	GO:0005774	vacuolar membrane	IEP	HCCA
CC	GO:0005794	Golgi apparatus	IEP	HCCA
CC	GO:0005802	trans-Golgi network	IEP	HCCA
BP	GO:0006497	protein lipidation	IEP	HCCA
BP	GO:0006498	N-terminal protein lipidation	IEP	HCCA
BP	GO:0006499	N-terminal protein myristoylation	IEP	HCCA
BP	GO:0006825	copper ion transport	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007155	cell adhesion	IEP	HCCA
CC	GO:0009505	plant-type cell wall	IEP	HCCA
BP	GO:0010048	vernalization response	IEP	HCCA
BP	GO:0010053	root epidermal cell differentiation	IEP	HCCA
BP	GO:0010090	trichome morphogenesis	IEP	HCCA
MF	GO:0015089	high-affinity copper ion transmembrane transporter activity	IEP	HCCA
BP	GO:0015680	protein maturation by copper ion transfer	IEP	HCCA
MF	GO:0015923	mannosidase activity	IEP	HCCA
CC	GO:0016020	membrane	IEP	HCCA
BP	GO:0018377	protein myristoylation	IEP	HCCA
MF	GO:0019825	oxygen binding	IEP	HCCA
BP	GO:0021700	developmental maturation	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
CC	GO:0031090	organelle membrane	IEP	HCCA
BP	GO:0031365	N-terminal protein amino acid modification	IEP	HCCA
CC	GO:0031410	cytoplasmic vesicle	IEP	HCCA
CC	GO:0031982	vesicle	IEP	HCCA
BP	GO:0043543	protein acylation	IEP	HCCA
BP	GO:0045010	actin nucleation	IEP	HCCA
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	HCCA
MF	GO:0046915	transition metal ion transmembrane transporter activity	IEP	HCCA
BP	GO:0048469	cell maturation	IEP	HCCA
BP	GO:0048764	trichoblast maturation	IEP	HCCA
BP	GO:0048765	root hair cell differentiation	IEP	HCCA
BP	GO:0051604	protein maturation	IEP	HCCA
BP	GO:0071695	anatomical structure maturation	IEP	HCCA
BP	GO:0090627	plant epidermal cell differentiation	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
CC	GO:0097708	intracellular vesicle	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	109	157

External Links

No external refs found!

AT3G10760

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation