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  5. AT3G10260

AT3G10260


Description : Reticulon family protein


Gene families : OG0000272 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000272_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G10260

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00230610 evm_27.TU.AmTr_v1... Reticulon-like protein B10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g01919 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Als_g42720 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Als_g51885 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Azfi_s0037.g026028 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.04 OrthoFinder output from all 47 species
Cba_g04424 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Cba_g31464 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dac_g05550 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dde_g02070 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Dde_g29874 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Dde_g49439 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Lfl_g22278 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Lfl_g27211 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
MA_133421g0010 No alias ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Msp_g14633 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Msp_g26217 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Nbi_g02975 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Pir_g24694 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species
Pnu_g00356 RTNLB2, BTI2 ER-tubule curvature-inducing protein *(Reticulon) &... 0.02 OrthoFinder output from all 47 species
Solyc01g095200.3.1 Solyc01g095200 ER-associated protein (Reticulon) 0.03 OrthoFinder output from all 47 species
Solyc06g049060.3.1 Solyc06g049060 ER-associated protein (Reticulon) 0.05 OrthoFinder output from all 47 species
Spa_g37965 No alias ER-tubule curvature-inducing protein *(Reticulon) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005739 mitochondrion IDA Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
CC GO:0005783 endoplasmic reticulum ISS Interproscan
BP GO:0006612 protein targeting to membrane RCA Interproscan
BP GO:0009963 positive regulation of flavonoid biosynthetic process RCA Interproscan
BP GO:0010363 regulation of plant-type hypersensitive response RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0002229 defense response to oomycetes IEP HCCA
BP GO:0002239 response to oomycetes IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0003840 obsolete gamma-glutamyltransferase activity IEP HCCA
MF GO:0004311 farnesyltranstransferase activity IEP HCCA
MF GO:0004659 prenyltransferase activity IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006743 ubiquinone metabolic process IEP HCCA
BP GO:0006744 ubiquinone biosynthetic process IEP HCCA
BP GO:0006749 glutathione metabolic process IEP HCCA
BP GO:0006751 glutathione catabolic process IEP HCCA
BP GO:0006805 xenobiotic metabolic process IEP HCCA
BP GO:0007044 cell-substrate junction assembly IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016706 2-oxoglutarate-dependent dioxygenase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016746 acyltransferase activity IEP HCCA
MF GO:0016755 aminoacyltransferase activity IEP HCCA
MF GO:0016756 glutathione gamma-glutamylcysteinyltransferase activity IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034329 cell junction assembly IEP HCCA
BP GO:0034330 cell junction organization IEP HCCA
BP GO:0042180 cellular ketone metabolic process IEP HCCA
BP GO:0042181 ketone biosynthetic process IEP HCCA
BP GO:0042219 cellular modified amino acid catabolic process IEP HCCA
BP GO:0043171 peptide catabolic process IEP HCCA
BP GO:0044273 sulfur compound catabolic process IEP HCCA
BP GO:0048041 focal adhesion assembly IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0150115 cell-substrate junction organization IEP HCCA
BP GO:1901661 quinone metabolic process IEP HCCA
BP GO:1901663 quinone biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR003388 Reticulon 62 215
No external refs found!