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  5. AT3G09800

AT3G09800


Description : SNARE-like superfamily protein


Gene families : OG0003673 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003673_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G09800

Target Alias Description ECC score Gene Family Method Actions
Cba_g02394 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Cre08.g371450 No alias Vesicle trafficking.Coat protein I (COPI) coatomer... 0.01 OrthoFinder output from all 47 species
LOC_Os05g38610.1 LOC_Os05g38610 subunit zeta of cargo adaptor F-subcomplex 0.03 OrthoFinder output from all 47 species
MA_10433636g0010 No alias subunit zeta of cargo adaptor F-subcomplex 0.02 OrthoFinder output from all 47 species
Msp_g00292 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.03 OrthoFinder output from all 47 species
Pp3c4_17280V3.1 Pp3c4_17280 SNARE-like superfamily protein 0.01 OrthoFinder output from all 47 species
Sam_g27485 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Spa_g14691 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species
Spa_g51092 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.04 OrthoFinder output from all 47 species
Tin_g06378 No alias subunit zeta of cargo adaptor F-subcomplex & original... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport ISS Interproscan
CC GO:0030125 clathrin vesicle coat ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
MF GO:0005459 UDP-galactose transmembrane transporter activity IEP HCCA
MF GO:0005460 UDP-glucose transmembrane transporter activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
BP GO:0006863 purine nucleobase transport IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015786 UDP-glucose transmembrane transport IEP HCCA
BP GO:0015851 nucleobase transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0048364 root development IEP HCCA
BP GO:0048468 cell development IEP HCCA
BP GO:0048527 lateral root development IEP HCCA
BP GO:0048528 post-embryonic root development IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0080147 root hair cell development IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0090696 post-embryonic plant organ development IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR022775 AP_mu_sigma_su 9 150
No external refs found!