Description : Homeodomain-like superfamily protein
Gene families : OG0000435 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000435_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00001p00272270 | LHY1, LHY,... | Multi-process regulation.circadian clock.core oscillator... | 0.1 | OrthoFinder output from all 47 species | |
AMTR_s00044p00072910 | RVE2, CIR1,... | RNA biosynthesis.transcriptional activation.MYB... | 0.04 | OrthoFinder output from all 47 species | |
Als_g15171 | RVE1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.07 | OrthoFinder output from all 47 species | |
Aob_g01863 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene31231.t1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Aspi01Gene31232.t1 | LHY1, LHY,... | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.04 | OrthoFinder output from all 47 species | |
Aspi01Gene31403.t1 | RVE1, Aspi01Gene31403 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0001.g000277 | No alias | circadian clock factor *(REVEILLE) & original... | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0005.g008971 | RVE1 | transcription factor *(REVEILLE) & original description:... | 0.06 | OrthoFinder output from all 47 species | |
Azfi_s0042.g026930 | CCA1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.06 | OrthoFinder output from all 47 species | |
Cba_g24529 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.04G087900.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.12 | OrthoFinder output from all 47 species | |
Ceric.06G032400.1 | RVE2, CIR1,... | transcription factor *(REVEILLE) & original description:... | 0.09 | OrthoFinder output from all 47 species | |
Ceric.07G057200.1 | RVE1, Ceric.07G057200 | transcription factor *(REVEILLE) & original description:... | 0.04 | OrthoFinder output from all 47 species | |
Cre12.g514400 | RVE2, CIR1 | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
Dac_g06441 | No alias | transcription factor *(REVEILLE) & original description: none | 0.06 | OrthoFinder output from all 47 species | |
Dac_g11557 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dac_g22032 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Dde_g23475 | RVE1 | circadian clock core oscillator protein *(LHY/CCA1) &... | 0.04 | OrthoFinder output from all 47 species | |
Ehy_g02839 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
GSVIVT01025544001 | No alias | Multi-process regulation.circadian clock.evening element... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01027456001 | CCA1 | Multi-process regulation.circadian clock.core oscillator... | 0.09 | OrthoFinder output from all 47 species | |
GSVIVT01035231001 | RVE1 | RNA biosynthesis.transcriptional activation.MYB... | 0.06 | OrthoFinder output from all 47 species | |
Gb_28874 | LHY1, LHY | transcription factor (MYB-related). circadian clock core... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os02g45670.1 | LOC_Os02g45670 | transcription factor (MYB-related). REVEILLE circadian... | 0.08 | OrthoFinder output from all 47 species | |
LOC_Os06g01670.1 | LOC_Os06g01670 | transcription factor (MYB-related). REVEILLE circadian... | 0.04 | OrthoFinder output from all 47 species | |
LOC_Os06g51260.1 | RVE2, CIR1,... | transcription factor (MYB-related) | 0.07 | OrthoFinder output from all 47 species | |
LOC_Os08g06110.3 | LHY1, LHY, LOC_Os08g06110 | transcription factor (MYB-related). circadian clock core... | 0.05 | OrthoFinder output from all 47 species | |
Len_g19700 | RVE1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
MA_10289482g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
Msp_g26311 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Pir_g28300 | EPR1, RVE7 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g42013 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0034.g011198 | No alias | circadian clock factor *(REVEILLE) & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0048.g013571 | RVE1 | transcription factor *(REVEILLE) & original description:... | 0.05 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0053.g014166 | RVE2, CIR1 | transcription factor *(REVEILLE) & original description:... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g49740 | No alias | transcription factor *(REVEILLE) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g51660 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Smo166821 | No alias | Multi-process regulation.circadian clock.core oscillator... | 0.11 | OrthoFinder output from all 47 species | |
Smo78045 | No alias | Multi-process regulation.circadian clock.evening element... | 0.03 | OrthoFinder output from all 47 species | |
Solyc02g036370.3.1 | RVE1, Solyc02g036370 | transcription factor (MYB-related) | 0.04 | OrthoFinder output from all 47 species | |
Solyc03g098320.4.1 | RVE1, Solyc03g098320 | transcription factor (MYB-related) | 0.15 | OrthoFinder output from all 47 species | |
Solyc10g005080.3.1 | LHY1, LHY, Solyc10g005080 | transcription factor (MYB-related). circadian clock core... | 0.1 | OrthoFinder output from all 47 species | |
Solyc10g084370.3.1 | Solyc10g084370 | transcription factor (MYB-related). REVEILLE circadian... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g38661 | No alias | circadian clock factor *(REVEILLE) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Zm00001e006465_P001 | Zm00001e006465 | transcription factor (MYB-related) | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e013333_P002 | RVE2, CIR1,... | transcription factor (MYB-related) | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e021724_P005 | LHY1, LHY, Zm00001e021724 | transcription factor (MYB-related). circadian clock core... | 0.07 | OrthoFinder output from all 47 species | |
Zm00001e023232_P002 | Zm00001e023232 | transcription factor (MYB-related). REVEILLE circadian... | 0.05 | OrthoFinder output from all 47 species | |
Zm00001e040217_P001 | LHY1, LHY, Zm00001e040217 | circadian clock core oscillator protein (LHY|CCA1) | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003677 | DNA binding | ISS | Interproscan |
MF | GO:0003700 | DNA-binding transcription factor activity | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | RCA | Interproscan |
BP | GO:0006355 | regulation of DNA-templated transcription | TAS | Interproscan |
BP | GO:0007623 | circadian rhythm | RCA | Interproscan |
BP | GO:0009651 | response to salt stress | IEP | Interproscan |
BP | GO:0009651 | response to salt stress | RCA | Interproscan |
BP | GO:0009723 | response to ethylene | IEP | Interproscan |
BP | GO:0009723 | response to ethylene | RCA | Interproscan |
BP | GO:0009733 | response to auxin | IEP | Interproscan |
BP | GO:0009733 | response to auxin | RCA | Interproscan |
BP | GO:0009737 | response to abscisic acid | IEP | Interproscan |
BP | GO:0009737 | response to abscisic acid | RCA | Interproscan |
BP | GO:0009739 | response to gibberellin | IEP | Interproscan |
BP | GO:0009739 | response to gibberellin | RCA | Interproscan |
BP | GO:0009751 | response to salicylic acid | IEP | Interproscan |
BP | GO:0009751 | response to salicylic acid | RCA | Interproscan |
BP | GO:0009753 | response to jasmonic acid | IEP | Interproscan |
BP | GO:0009753 | response to jasmonic acid | RCA | Interproscan |
BP | GO:0032922 | circadian regulation of gene expression | IMP | Interproscan |
BP | GO:0043966 | histone H3 acetylation | IMP | Interproscan |
BP | GO:0046686 | response to cadmium ion | IEP | Interproscan |
BP | GO:0046686 | response to cadmium ion | RCA | Interproscan |
BP | GO:0048573 | photoperiodism, flowering | IMP | Interproscan |
BP | GO:0048574 | long-day photoperiodism, flowering | RCA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
BP | GO:0003006 | developmental process involved in reproduction | IEP | HCCA |
MF | GO:0003899 | DNA-directed 5'-3' RNA polymerase activity | IEP | HCCA |
MF | GO:0004069 | L-aspartate:2-oxoglutarate aminotransferase activity | IEP | HCCA |
MF | GO:0004871 | obsolete signal transducer activity | IEP | HCCA |
MF | GO:0005515 | protein binding | IEP | HCCA |
CC | GO:0005834 | heterotrimeric G-protein complex | IEP | HCCA |
CC | GO:0005884 | actin filament | IEP | HCCA |
BP | GO:0006066 | alcohol metabolic process | IEP | HCCA |
BP | GO:0006281 | DNA repair | IEP | HCCA |
BP | GO:0006352 | DNA-templated transcription initiation | IEP | HCCA |
BP | GO:0006767 | water-soluble vitamin metabolic process | IEP | HCCA |
BP | GO:0006793 | phosphorus metabolic process | IEP | HCCA |
BP | GO:0006796 | phosphate-containing compound metabolic process | IEP | HCCA |
BP | GO:0006974 | cellular response to DNA damage stimulus | IEP | HCCA |
BP | GO:0006996 | organelle organization | IEP | HCCA |
BP | GO:0007015 | actin filament organization | IEP | HCCA |
MF | GO:0008270 | zinc ion binding | IEP | HCCA |
MF | GO:0008483 | transaminase activity | IEP | HCCA |
BP | GO:0008655 | pyrimidine-containing compound salvage | IEP | HCCA |
MF | GO:0008793 | aromatic-amino-acid:2-oxoglutarate aminotransferase activity | IEP | HCCA |
MF | GO:0008928 | mannose-1-phosphate guanylyltransferase (GDP) activity | IEP | HCCA |
BP | GO:0009058 | biosynthetic process | IEP | HCCA |
BP | GO:0009110 | vitamin biosynthetic process | IEP | HCCA |
BP | GO:0009266 | response to temperature stimulus | IEP | HCCA |
BP | GO:0009411 | response to UV | IEP | HCCA |
BP | GO:0009637 | response to blue light | IEP | HCCA |
BP | GO:0009638 | phototropism | IEP | HCCA |
BP | GO:0009639 | response to red or far red light | IEP | HCCA |
BP | GO:0009657 | plastid organization | IEP | HCCA |
BP | GO:0009658 | chloroplast organization | IEP | HCCA |
BP | GO:0009743 | response to carbohydrate | IEP | HCCA |
BP | GO:0009838 | abscission | IEP | HCCA |
BP | GO:0009902 | chloroplast relocation | IEP | HCCA |
BP | GO:0009903 | chloroplast avoidance movement | IEP | HCCA |
BP | GO:0009904 | chloroplast accumulation movement | IEP | HCCA |
BP | GO:0009909 | regulation of flower development | IEP | HCCA |
BP | GO:0009954 | proximal/distal pattern formation | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010099 | regulation of photomorphogenesis | IEP | HCCA |
BP | GO:0010100 | negative regulation of photomorphogenesis | IEP | HCCA |
BP | GO:0010227 | floral organ abscission | IEP | HCCA |
BP | GO:0010264 | myo-inositol hexakisphosphate biosynthetic process | IEP | HCCA |
MF | GO:0010471 | GDP-galactose:mannose-1-phosphate guanylyltransferase activity | IEP | HCCA |
MF | GO:0010472 | GDP-galactose:glucose-1-phosphate guanylyltransferase activity | IEP | HCCA |
MF | GO:0010473 | GDP-galactose:myoinositol-1-phosphate guanylyltransferase activity | IEP | HCCA |
BP | GO:0010557 | positive regulation of macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0010604 | positive regulation of macromolecule metabolic process | IEP | HCCA |
MF | GO:0015205 | nucleobase transmembrane transporter activity | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016757 | glycosyltransferase activity | IEP | HCCA |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | HCCA |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
MF | GO:0016846 | carbon-sulfur lyase activity | IEP | HCCA |
MF | GO:0016847 | 1-aminocyclopropane-1-carboxylate synthase activity | IEP | HCCA |
MF | GO:0016987 | sigma factor activity | IEP | HCCA |
BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
BP | GO:0019637 | organophosphate metabolic process | IEP | HCCA |
BP | GO:0019750 | chloroplast localization | IEP | HCCA |
BP | GO:0019751 | polyol metabolic process | IEP | HCCA |
BP | GO:0019852 | L-ascorbic acid metabolic process | IEP | HCCA |
BP | GO:0019853 | L-ascorbic acid biosynthetic process | IEP | HCCA |
MF | GO:0019904 | protein domain specific binding | IEP | HCCA |
BP | GO:0031325 | positive regulation of cellular metabolic process | IEP | HCCA |
BP | GO:0031328 | positive regulation of cellular biosynthetic process | IEP | HCCA |
CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
BP | GO:0032958 | inositol phosphate biosynthetic process | IEP | HCCA |
BP | GO:0033517 | myo-inositol hexakisphosphate metabolic process | IEP | HCCA |
BP | GO:0033554 | cellular response to stress | IEP | HCCA |
MF | GO:0034062 | 5'-3' RNA polymerase activity | IEP | HCCA |
BP | GO:0042364 | water-soluble vitamin biosynthetic process | IEP | HCCA |
BP | GO:0042752 | regulation of circadian rhythm | IEP | HCCA |
BP | GO:0042754 | negative regulation of circadian rhythm | IEP | HCCA |
MF | GO:0042802 | identical protein binding | IEP | HCCA |
BP | GO:0043100 | pyrimidine nucleobase salvage | IEP | HCCA |
MF | GO:0043169 | cation binding | IEP | HCCA |
BP | GO:0043393 | regulation of protein binding | IEP | HCCA |
BP | GO:0043433 | negative regulation of DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0043496 | regulation of protein homodimerization activity | IEP | HCCA |
BP | GO:0043647 | inositol phosphate metabolic process | IEP | HCCA |
BP | GO:0044092 | negative regulation of molecular function | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
BP | GO:0044283 | small molecule biosynthetic process | IEP | HCCA |
BP | GO:0045893 | positive regulation of DNA-templated transcription | IEP | HCCA |
BP | GO:0045935 | positive regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
BP | GO:0046165 | alcohol biosynthetic process | IEP | HCCA |
BP | GO:0046173 | polyol biosynthetic process | IEP | HCCA |
BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
MF | GO:0046872 | metal ion binding | IEP | HCCA |
MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
BP | GO:0048439 | flower morphogenesis | IEP | HCCA |
BP | GO:0048519 | negative regulation of biological process | IEP | HCCA |
BP | GO:0048580 | regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048581 | negative regulation of post-embryonic development | IEP | HCCA |
BP | GO:0048585 | negative regulation of response to stimulus | IEP | HCCA |
BP | GO:0048608 | reproductive structure development | IEP | HCCA |
BP | GO:0048653 | anther development | IEP | HCCA |
BP | GO:0048831 | regulation of shoot system development | IEP | HCCA |
BP | GO:0050793 | regulation of developmental process | IEP | HCCA |
BP | GO:0051017 | actin filament bundle assembly | IEP | HCCA |
BP | GO:0051090 | regulation of DNA-binding transcription factor activity | IEP | HCCA |
BP | GO:0051093 | negative regulation of developmental process | IEP | HCCA |
BP | GO:0051098 | regulation of binding | IEP | HCCA |
BP | GO:0051173 | positive regulation of nitrogen compound metabolic process | IEP | HCCA |
BP | GO:0051239 | regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051241 | negative regulation of multicellular organismal process | IEP | HCCA |
BP | GO:0051254 | positive regulation of RNA metabolic process | IEP | HCCA |
BP | GO:0051640 | organelle localization | IEP | HCCA |
BP | GO:0051644 | plastid localization | IEP | HCCA |
BP | GO:0051656 | establishment of organelle localization | IEP | HCCA |
BP | GO:0051667 | establishment of plastid localization | IEP | HCCA |
BP | GO:0051716 | cellular response to stimulus | IEP | HCCA |
BP | GO:0052386 | cell wall thickening | IEP | HCCA |
BP | GO:0052482 | defense response by cell wall thickening | IEP | HCCA |
BP | GO:0052542 | defense response by callose deposition | IEP | HCCA |
BP | GO:0052543 | callose deposition in cell wall | IEP | HCCA |
BP | GO:0052544 | defense response by callose deposition in cell wall | IEP | HCCA |
BP | GO:0061572 | actin filament bundle organization | IEP | HCCA |
BP | GO:0065009 | regulation of molecular function | IEP | HCCA |
MF | GO:0070568 | guanylyltransferase activity | IEP | HCCA |
BP | GO:0071214 | cellular response to abiotic stimulus | IEP | HCCA |
BP | GO:0071478 | cellular response to radiation | IEP | HCCA |
BP | GO:0071482 | cellular response to light stimulus | IEP | HCCA |
BP | GO:0071483 | cellular response to blue light | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
CC | GO:0080008 | Cul4-RING E3 ubiquitin ligase complex | IEP | HCCA |
MF | GO:0080046 | quercetin 4'-O-glucosyltransferase activity | IEP | HCCA |
MF | GO:0080048 | GDP-D-glucose phosphorylase activity | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
BP | GO:0097435 | supramolecular fiber organization | IEP | HCCA |
MF | GO:0097747 | RNA polymerase activity | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0099080 | supramolecular complex | IEP | HCCA |
CC | GO:0099081 | supramolecular polymer | IEP | HCCA |
CC | GO:0099512 | supramolecular fiber | IEP | HCCA |
CC | GO:0099513 | polymeric cytoskeletal fiber | IEP | HCCA |
BP | GO:0104004 | cellular response to environmental stimulus | IEP | HCCA |
CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
BP | GO:1901334 | lactone metabolic process | IEP | HCCA |
BP | GO:1901336 | lactone biosynthetic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
BP | GO:1901615 | organic hydroxy compound metabolic process | IEP | HCCA |
BP | GO:1901617 | organic hydroxy compound biosynthetic process | IEP | HCCA |
BP | GO:1902680 | positive regulation of RNA biosynthetic process | IEP | HCCA |
BP | GO:1903508 | positive regulation of nucleic acid-templated transcription | IEP | HCCA |
CC | GO:1905360 | GTPase complex | IEP | HCCA |
CC | GO:1990234 | transferase complex | IEP | HCCA |
BP | GO:2000026 | regulation of multicellular organismal development | IEP | HCCA |
BP | GO:2000030 | regulation of response to red or far red light | IEP | HCCA |
BP | GO:2000241 | regulation of reproductive process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001005 | SANT/Myb | 43 | 87 |
No external refs found! |