AT3G09370 (MYB3R-3, AtMYB3R3)

Aliases : MYB3R-3, AtMYB3R3

Description : myb domain protein 3r-3

Gene families : OG0000080 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G09370

Target	Alias	Description	ECC score	Gene Family Method
Adi_g014413	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Adi_g081416	ATMYB119, MYB119	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g01341	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.02	OrthoFinder output from all 47 species
Aev_g01523	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.05	OrthoFinder output from all 47 species
Ala_g28266	MYB70, AtMYB70	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.05	OrthoFinder output from all 47 species
Als_g12553	MYB77	MYB class-R2R3 subgroup-22/23 transcription factor &...	0.03	OrthoFinder output from all 47 species
Cba_g25580	MYB54, ATMYB54	MYB class-R2R3 subgroup-21 transcription factor &...	0.02	OrthoFinder output from all 47 species
GSVIVT01034171001	MYB3R-3, AtMYB3R3	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species
Gb_24073	MYB77	transcription factor (MYB)	0.03	OrthoFinder output from all 47 species
LOC_Os01g74590.1	MYBR1, MYB44,...	transcription factor (MYB)	0.02	OrthoFinder output from all 47 species
Msp_g26462	AtMYB98, MYB98	MYB class-R2R3 transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g11690	LOF2, MYB105, ATMYB105	MYB class-R2R3 subgroup-21 transcription factor &...	0.03	OrthoFinder output from all 47 species
Smo80553	BW52, ATMYB52, MYB52	RNA biosynthesis.transcriptional activation.MYB...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0003002	regionalization	IEP	HCCA
MF	GO:0003863	3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity	IEP	HCCA
MF	GO:0004021	L-alanine:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0004838	L-tyrosine:2-oxoglutarate aminotransferase activity	IEP	HCCA
BP	GO:0006284	base-excision repair	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0007275	multicellular organism development	IEP	HCCA
MF	GO:0008483	transaminase activity	IEP	HCCA
MF	GO:0008793	aromatic-amino-acid:2-oxoglutarate aminotransferase activity	IEP	HCCA
BP	GO:0009606	tropism	IEP	HCCA
BP	GO:0009629	response to gravity	IEP	HCCA
BP	GO:0009630	gravitropism	IEP	HCCA
BP	GO:0009641	shade avoidance	IEP	HCCA
BP	GO:0009683	indoleacetic acid metabolic process	IEP	HCCA
BP	GO:0009684	indoleacetic acid biosynthetic process	IEP	HCCA
BP	GO:0009850	auxin metabolic process	IEP	HCCA
BP	GO:0009851	auxin biosynthetic process	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0009958	positive gravitropism	IEP	HCCA
BP	GO:0010051	xylem and phloem pattern formation	IEP	HCCA
BP	GO:0010074	maintenance of meristem identity	IEP	HCCA
BP	GO:0010078	maintenance of root meristem identity	IEP	HCCA
BP	GO:0010087	phloem or xylem histogenesis	IEP	HCCA
MF	GO:0010326	methionine-oxo-acid transaminase activity	IEP	HCCA
BP	GO:0010588	cotyledon vascular tissue pattern formation	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0016125	sterol metabolic process	IEP	HCCA
BP	GO:0016126	sterol biosynthetic process	IEP	HCCA
MF	GO:0016624	oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor	IEP	HCCA
MF	GO:0016769	transferase activity, transferring nitrogenous groups	IEP	HCCA
MF	GO:0016846	carbon-sulfur lyase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019827	stem cell population maintenance	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0042430	indole-containing compound metabolic process	IEP	HCCA
BP	GO:0042435	indole-containing compound biosynthetic process	IEP	HCCA
BP	GO:0042446	hormone biosynthetic process	IEP	HCCA
CC	GO:0042995	cell projection	IEP	HCCA
MF	GO:0047312	L-phenylalanine:pyruvate aminotransferase activity	IEP	HCCA
MF	GO:0047635	alanine-oxo-acid transaminase activity	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048438	floral whorl development	IEP	HCCA
BP	GO:0048467	gynoecium development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0048825	cotyledon development	IEP	HCCA
MF	GO:0050048	L-leucine:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0050362	L-tryptophan:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA
MF	GO:0070529	L-tryptophan aminotransferase activity	IEP	HCCA
MF	GO:0070546	L-phenylalanine aminotransferase activity	IEP	HCCA
MF	GO:0070547	L-tyrosine aminotransferase activity	IEP	HCCA
MF	GO:0070548	L-glutamine aminotransferase activity	IEP	HCCA
BP	GO:0080022	primary root development	IEP	HCCA
MF	GO:0080097	L-tryptophan:pyruvate aminotransferase activity	IEP	HCCA
MF	GO:0080098	L-tyrosine:pyruvate aminotransferase activity	IEP	HCCA
MF	GO:0080099	L-methionine:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0080100	L-glutamine:2-oxoglutarate aminotransferase activity	IEP	HCCA
MF	GO:0080130	L-phenylalanine:2-oxoglutarate aminotransferase activity	IEP	HCCA
CC	GO:0090406	pollen tube	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
BP	GO:0098727	maintenance of cell number	IEP	HCCA
CC	GO:0120025	plasma membrane bounded cell projection	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001005	SANT/Myb	78	124

External Links

No external refs found!

AT3G09370 (MYB3R-3, AtMYB3R3)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation