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AT3G07880 (SCN1)


Aliases : SCN1

Description : Immunoglobulin E-set superfamily protein


Gene families : OG0001513 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001513_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G07880

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00005p00173830 SCN1,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
AT1G12070 No alias Immunoglobulin E-set superfamily protein 0.03 OrthoFinder output from all 47 species
Als_g00528 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Ceric.17G023500.1 SCN1, Ceric.17G023500 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.03 OrthoFinder output from all 47 species
Dcu_g00737 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Dcu_g06230 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.05 OrthoFinder output from all 47 species
Dde_g01953 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Ehy_g08922 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
GSVIVT01031620001 SCN1 Multi-process regulation.Rop GTPase regulatory... 0.02 OrthoFinder output from all 47 species
LOC_Os01g68540.1 SCN1, LOC_Os01g68540 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
LOC_Os02g48730.1 SCN1, LOC_Os02g48730 guanine nucleotide dissociation inhibitor (RopGDI) 0.01 OrthoFinder output from all 47 species
MA_205752g0010 SCN1 guanine nucleotide dissociation inhibitor (RopGDI) 0.01 OrthoFinder output from all 47 species
Msp_g21563 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.01 OrthoFinder output from all 47 species
Ppi_g08650 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011233 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0155.g023612 SCN1 guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.02 OrthoFinder output from all 47 species
Sam_g08474 No alias guanine nucleotide dissociation inhibitor *(RopGDI) &... 0.01 OrthoFinder output from all 47 species
Solyc11g012270.2.1 SCN1, Solyc11g012270 guanine nucleotide dissociation inhibitor (RopGDI) 0.04 OrthoFinder output from all 47 species
Zm00001e027138_P001 SCN1, Zm00001e027138 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Zm00001e027139_P001 SCN1, Zm00001e027139 guanine nucleotide dissociation inhibitor (RopGDI) 0.02 OrthoFinder output from all 47 species
Zm00001e031533_P001 SCN1, Zm00001e031533 guanine nucleotide dissociation inhibitor (RopGDI) 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005094 Rho GDP-dissociation inhibitor activity ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
CC GO:0005737 cytoplasm ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0007015 actin filament organization RCA Interproscan
BP GO:0009932 cell tip growth IMP Interproscan
BP GO:0010053 root epidermal cell differentiation IMP Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000406 Rho_GDI 52 236
No external refs found!