AT3G05980


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G19340.1); Has 202 Blast hits to 202 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 39; Fungi - 4; Plants - 148; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink).


Gene families : OG0001961 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001961_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05980
Cluster HCCA: Cluster_131

Target Alias Description ECC score Gene Family Method Actions
Adi_g116381 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g27098 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g05194 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15808 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.38G065600.1 Ceric.38G065600 not classified & original description: pacid=50580642... 0.03 OrthoFinder output from all 47 species
Dac_g09049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g11864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g00615 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g10676 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g054280.1.1 Solyc06g054280 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Tin_g05577 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e023821_P002 Zm00001e023821 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e025161_P001 Zm00001e025161 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Type GO Term Name Evidence Source
BP GO:0000902 cell morphogenesis IEP HCCA
BP GO:0000904 cell morphogenesis involved in differentiation IEP HCCA
BP GO:0010090 trichome morphogenesis IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048581 negative regulation of post-embryonic development IEP HCCA
BP GO:0051093 negative regulation of developmental process IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051241 negative regulation of multicellular organismal process IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000038 regulation of stomatal complex development IEP HCCA
BP GO:2000122 negative regulation of stomatal complex development IEP HCCA

No InterPro domains available for this sequence

No external refs found!