1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT3G05390

AT3G05390


Description : FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF248, methyltransferase putative (InterPro:IPR004159); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT4G01240.1); Has 507 Blast hits to 498 proteins in 33 species: Archae - 4; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 493; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).


Gene families : OG0001244 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001244_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05390

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00138p00094100 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
Aev_g01031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g11315 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11997 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene16473.t1 Aspi01Gene16473 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene57852.t1 Aspi01Gene57852 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g25472 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g13955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Mp5g15060.1 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005794 Golgi apparatus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006084 acetyl-CoA metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006370 7-methylguanosine mRNA capping IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006637 acyl-CoA metabolic process IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006865 amino acid transport IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0008643 carbohydrate transport IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009414 response to water deprivation IEP HCCA
BP GO:0009415 response to water IEP HCCA
BP GO:0009452 7-methylguanosine RNA capping IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
CC GO:0009986 cell surface IEP HCCA
BP GO:0010817 regulation of hormone levels IEP HCCA
BP GO:0015711 organic anion transport IEP HCCA
BP GO:0015774 polysaccharide transport IEP HCCA
BP GO:0015804 neutral amino acid transport IEP HCCA
BP GO:0015824 proline transport IEP HCCA
BP GO:0015849 organic acid transport IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
BP GO:0016128 phytosteroid metabolic process IEP HCCA
BP GO:0016129 phytosteroid biosynthetic process IEP HCCA
BP GO:0016131 brassinosteroid metabolic process IEP HCCA
BP GO:0016132 brassinosteroid biosynthetic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0035383 thioester metabolic process IEP HCCA
BP GO:0036260 RNA capping IEP HCCA
BP GO:0042445 hormone metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0046942 carboxylic acid transport IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004159 Put_SAM_MeTrfase 283 414
No external refs found!