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  5. AT3G05300

AT3G05300


Description : Cytidine/deoxycytidylate deaminase family protein


Gene families : OG0002577 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002577_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G05300
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT5G28050 No alias Cytidine/deoxycytidylate deaminase family protein 0.03 OrthoFinder output from all 47 species
Ala_g00687 No alias guanosine deaminase *(GSDA) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01975 No alias guanosine deaminase *(GSDA) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06039 No alias guanosine deaminase *(GSDA) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g02887 No alias guanosine deaminase *(GSDA) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding ISS Interproscan
CC GO:0009507 chloroplast ISM Interproscan
MF GO:0016787 hydrolase activity ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0003002 regionalization IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006935 chemotaxis IEP HCCA
BP GO:0007275 multicellular organism development IEP HCCA
BP GO:0007389 pattern specification process IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009061 anaerobic respiration IEP HCCA
BP GO:0009686 gibberellin biosynthetic process IEP HCCA
BP GO:0009734 auxin-activated signaling pathway IEP HCCA
BP GO:0009799 specification of symmetry IEP HCCA
BP GO:0009830 cell wall modification involved in abscission IEP HCCA
BP GO:0009845 seed germination IEP HCCA
BP GO:0009855 determination of bilateral symmetry IEP HCCA
BP GO:0009887 animal organ morphogenesis IEP HCCA
BP GO:0009937 regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009938 negative regulation of gibberellic acid mediated signaling pathway IEP HCCA
BP GO:0009944 polarity specification of adaxial/abaxial axis IEP HCCA
BP GO:0009956 radial pattern formation IEP HCCA
BP GO:0010014 meristem initiation IEP HCCA
BP GO:0010162 seed dormancy process IEP HCCA
BP GO:0010183 pollen tube guidance IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0016102 diterpenoid biosynthetic process IEP HCCA
MF GO:0016405 CoA-ligase activity IEP HCCA
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP HCCA
MF GO:0016752 sinapoyltransferase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0018858 benzoate-CoA ligase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0019915 lipid storage IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
BP GO:0022411 cellular component disassembly IEP HCCA
BP GO:0022611 dormancy process IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032502 developmental process IEP HCCA
BP GO:0033993 response to lipid IEP HCCA
BP GO:0040011 locomotion IEP HCCA
BP GO:0040019 positive regulation of embryonic development IEP HCCA
BP GO:0042330 taxis IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044277 cell wall disassembly IEP HCCA
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP HCCA
BP GO:0045995 regulation of embryonic development IEP HCCA
BP GO:0048479 style development IEP HCCA
BP GO:0048480 stigma development IEP HCCA
BP GO:0048609 multicellular organismal reproductive process IEP HCCA
BP GO:0048856 anatomical structure development IEP HCCA
BP GO:0050826 response to freezing IEP HCCA
BP GO:0050918 positive chemotaxis IEP HCCA
BP GO:0051235 maintenance of location IEP HCCA
BP GO:0060771 phyllotactic patterning IEP HCCA
BP GO:0060772 leaf phyllotactic patterning IEP HCCA
BP GO:0060774 auxin mediated signaling pathway involved in phyllotactic patterning IEP HCCA
BP GO:0065001 specification of axis polarity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR028883 tRNA_aden_deaminase 6 65
No external refs found!