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AT3G03000


Description : EF hand calcium-binding protein family


Gene families : OG0002349 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002349_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G03000
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Adi_g050321 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g02308 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08898 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene57140.t1 Aspi01Gene57140 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Gb_09202 No alias Probable calcium-binding protein CML15 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os05g50180.1 LOC_Os05g50180 Probable calcium-binding protein CML14 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Len_g00935 No alias calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Mp1g18460.1 No alias Probable calcium-binding protein CML17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g114420.1.1 Solyc03g114420 Probable calcium-binding protein CML15 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e032510_P001 Zm00001e032510 Probable calcium-binding protein CML14 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IDA Interproscan
MF GO:0005509 calcium ion binding ISS Interproscan
MF GO:0005515 protein binding IPI Interproscan
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway RCA Interproscan
BP GO:0043269 regulation of monoatomic ion transport IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
MF GO:0009672 auxin:proton symporter activity IEP HCCA
BP GO:0009914 hormone transport IEP HCCA
BP GO:0009926 auxin polar transport IEP HCCA
BP GO:0010440 stomatal lineage progression IEP HCCA
MF GO:0015293 symporter activity IEP HCCA
MF GO:0015294 solute:monoatomic cation symporter activity IEP HCCA
MF GO:0015295 solute:proton symporter activity IEP HCCA
BP GO:0033037 polysaccharide localization IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0052545 callose localization IEP HCCA
BP GO:0060918 auxin transport IEP HCCA
MF GO:0080161 auxin transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 93 155
IPR002048 EF_hand_dom 20 81
No external refs found!