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  5. AT3G02640

AT3G02640


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G16250.1); Has 96 Blast hits to 96 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).


Gene families : OG0004370 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004370_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT3G02640
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00237990 evm_27.TU.AmTr_v1... No description available 0.07 OrthoFinder output from all 47 species
AMTR_s00066p00160870 evm_27.TU.AmTr_v1... No description available 0.09 OrthoFinder output from all 47 species
Aev_g22298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32668 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g04167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04668 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g07436 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Aspi01Gene13483.t1 Aspi01Gene13483 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46914.t1 Aspi01Gene46914 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67581.t1 Aspi01Gene67581 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.28G015700.1 Ceric.28G015700 not classified & original description: pacid=50570153... 0.05 OrthoFinder output from all 47 species
Dac_g14615 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g00561 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g05252 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
GSVIVT01007183001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g67110.1 LOC_Os01g67110 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
LOC_Os04g41900.1 LOC_Os04g41900 no hits & (original description: none) 0.15 OrthoFinder output from all 47 species
LOC_Os05g43140.1 LOC_Os05g43140 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Len_g00262 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g07623 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Lfl_g31204 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
MA_488033g0010 No alias no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
MA_7639g0010 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Msp_g04591 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Nbi_g39588 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Ore_g17372 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g00575 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Smo405133 No alias No description available 0.02 OrthoFinder output from all 47 species
Solyc07g041770.1.1 Solyc07g041770 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Spa_g25154 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Tin_g46205 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000567_P001 Zm00001e000567 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e007700_P001 Zm00001e007700 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Zm00001e018978_P001 Zm00001e018978 no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Zm00001e028566_P001 Zm00001e028566 no hits & (original description: none) 0.08 OrthoFinder output from all 47 species
Zm00001e032081_P001 Zm00001e032081 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e041147_P001 Zm00001e041147 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
BP GO:0016572 obsolete histone phosphorylation RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP HCCA
BP GO:0000910 cytokinesis IEP HCCA
BP GO:0000911 cytokinesis by cell plate formation IEP HCCA
BP GO:0003006 developmental process involved in reproduction IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004693 cyclin-dependent protein serine/threonine kinase activity IEP HCCA
MF GO:0005200 structural constituent of cytoskeleton IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
CC GO:0005886 plasma membrane IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007051 spindle organization IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
BP GO:0008283 cell population proliferation IEP HCCA
CC GO:0009504 cell plate IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
CC GO:0009524 phragmoplast IEP HCCA
BP GO:0009790 embryo development IEP HCCA
BP GO:0009793 embryo development ending in seed dormancy IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010075 regulation of meristem growth IEP HCCA
BP GO:0010376 stomatal complex formation IEP HCCA
BP GO:0010389 regulation of G2/M transition of mitotic cell cycle IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
CC GO:0012505 endomembrane system IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0016032 viral process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016458 obsolete gene silencing IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
CC GO:0031225 obsolete anchored component of membrane IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044000 movement in host IEP HCCA
BP GO:0044001 migration in host IEP HCCA
BP GO:0044403 biological process involved in symbiotic interaction IEP HCCA
CC GO:0045298 tubulin complex IEP HCCA
CC GO:0046658 obsolete anchored component of plasma membrane IEP HCCA
BP GO:0046739 transport of virus in multicellular host IEP HCCA
BP GO:0046794 transport of virus IEP HCCA
BP GO:0048366 leaf development IEP HCCA
BP GO:0048449 floral organ formation IEP HCCA
BP GO:0048580 regulation of post-embryonic development IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0048646 anatomical structure formation involved in morphogenesis IEP HCCA
BP GO:0048825 cotyledon development IEP HCCA
BP GO:0048827 phyllome development IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050793 regulation of developmental process IEP HCCA
BP GO:0051225 spindle assembly IEP HCCA
BP GO:0051239 regulation of multicellular organismal process IEP HCCA
BP GO:0051701 biological process involved in interaction with host IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0061062 regulation of nematode larval development IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070925 organelle assembly IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097472 cyclin-dependent protein kinase activity IEP HCCA
BP GO:0140694 non-membrane-bounded organelle assembly IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902749 regulation of cell cycle G2/M phase transition IEP HCCA
BP GO:1905393 plant organ formation IEP HCCA
BP GO:2000026 regulation of multicellular organismal development IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA

No InterPro domains available for this sequence

No external refs found!