AT3G01770 (ATBET10, BET10)

Aliases : ATBET10, BET10

Description : bromodomain and extraterminal domain protein 10

Gene families : OG0000177 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000177_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT3G01770
Cluster	HCCA: Cluster_68

Target	Alias	Description	ECC score	Gene Family Method
Adi_g057352	GTE3	transcriptional co-activator *(BET/GTE) & original...	0.02	OrthoFinder output from all 47 species
Adi_g114774	GTE4	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Als_g63818	GTE6	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Cba_g12426	GTE4	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Ceric.38G016200.1	BET9, ATBET9,...	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g15873	GTE6	transcriptional co-activator *(BET/GTE) & original...	0.02	OrthoFinder output from all 47 species
Ehy_g32331	GTE8	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Gb_30202	GTE8	transcriptional co-activator (BET/GTE)	0.03	OrthoFinder output from all 47 species
MA_10429630g0020	NPX1	Transcription factor GTE10 OS=Arabidopsis thaliana...	0.03	OrthoFinder output from all 47 species
Mp2g23150.1	GTE7	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Sam_g13117	No alias	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Sam_g14422	No alias	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Spa_g00399	GTE1, GTE01, IMB1	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Spa_g26387	GTE4	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Spa_g48528	GTE4	transcriptional co-activator *(BET/GTE) & original...	0.03	OrthoFinder output from all 47 species
Tin_g31516	GTE3	transcriptional co-activator *(BET/GTE) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e021805_P005	BET9, ATBET9,...	transcriptional co-activator (BET/GTE)	0.04	OrthoFinder output from all 47 species
Zm00001e029260_P001	BET9, ATBET9,...	transcriptional co-activator (BET/GTE)	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IPI	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009314	response to radiation	None	Extended
BP	GO:0009416	response to light stimulus	None	Extended
BP	GO:0009628	response to abiotic stimulus	None	Extended
BP	GO:0009648	photoperiodism	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009891	positive regulation of biosynthetic process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0022414	reproductive process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031325	positive regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0031328	positive regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045893	positive regulation of DNA-templated transcription	IDA	Interproscan
BP	GO:0045935	positive regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0048522	positive regulation of cellular process	None	Extended
BP	GO:0048573	photoperiodism, flowering	RCA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0051254	positive regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1902680	positive regulation of RNA biosynthetic process	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:1903508	positive regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000151	ubiquitin ligase complex	IEP	HCCA
BP	GO:0000956	nuclear-transcribed mRNA catabolic process	IEP	HCCA
MF	GO:0003684	damaged DNA binding	IEP	HCCA
CC	GO:0005834	heterotrimeric G-protein complex	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006401	RNA catabolic process	IEP	HCCA
BP	GO:0006402	mRNA catabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009057	macromolecule catabolic process	IEP	HCCA
BP	GO:0009892	negative regulation of metabolic process	IEP	HCCA
BP	GO:0010605	negative regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010629	negative regulation of gene expression	IEP	HCCA
BP	GO:0016070	RNA metabolic process	IEP	HCCA
BP	GO:0016071	mRNA metabolic process	IEP	HCCA
BP	GO:0019439	aromatic compound catabolic process	IEP	HCCA
CC	GO:0031461	cullin-RING ubiquitin ligase complex	IEP	HCCA
BP	GO:0034655	nucleobase-containing compound catabolic process	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0044265	cellular macromolecule catabolic process	IEP	HCCA
BP	GO:0044270	cellular nitrogen compound catabolic process	IEP	HCCA
BP	GO:0046700	heterocycle catabolic process	IEP	HCCA
BP	GO:0048519	negative regulation of biological process	IEP	HCCA
CC	GO:0080008	Cul4-RING E3 ubiquitin ligase complex	IEP	HCCA
CC	GO:0098797	plasma membrane protein complex	IEP	HCCA
BP	GO:1901361	organic cyclic compound catabolic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1905360	GTPase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027353	NET_dom	280	341
IPR001487	Bromodomain	133	216

External Links

No external refs found!

AT3G01770 (ATBET10, BET10)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation