1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G48160

AT2G48160


Description : Tudor/PWWP/MBT domain-containing protein


Gene families : OG0001723 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001723_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G48160
Cluster HCCA: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
Adi_g055484 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g29120 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g20186 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene42434.t1 HUA2, Aspi01Gene42434 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0119.g046734 HUA2 HUA2-type transcription factor & original description: CDS=1-4872 0.03 OrthoFinder output from all 47 species
Ceric.36G034600.1 HUA2, Ceric.36G034600 HUA2-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dde_g05965 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g13274 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g05043 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g21971 HUA2 HUA2-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04290 HUA2 HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_9328225g0010 HUA2 Protein HUA2-LIKE 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp8g15320.1 HUA2 transcription factor (HUA2) 0.02 OrthoFinder output from all 47 species
Pir_g24326 No alias HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g51385 No alias HUA2-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e024276_P001 HUA2, Zm00001e024276 transcription factor (HUA2) 0.02 OrthoFinder output from all 47 species
Zm00001e038169_P004 Zm00001e038169 transcription factor (HUA2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003713 transcription coactivator activity IEP HCCA
MF GO:0004430 1-phosphatidylinositol 4-kinase activity IEP HCCA
CC GO:0005911 cell-cell junction IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006491 N-glycan processing IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006517 protein deglycosylation IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009292 horizontal gene transfer IEP HCCA
BP GO:0009294 DNA-mediated transformation IEP HCCA
CC GO:0009506 plasmodesma IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009629 response to gravity IEP HCCA
BP GO:0009630 gravitropism IEP HCCA
BP GO:0009890 negative regulation of biosynthetic process IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0009908 flower development IEP HCCA
BP GO:0010048 vernalization response IEP HCCA
BP GO:0010393 galacturonan metabolic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010558 negative regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0016926 protein desumoylation IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
CC GO:0030054 cell junction IEP HCCA
BP GO:0031327 negative regulation of cellular biosynthetic process IEP HCCA
MF GO:0033925 mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0045488 pectin metabolic process IEP HCCA
BP GO:0045489 pectin biosynthetic process IEP HCCA
BP GO:0045892 negative regulation of DNA-templated transcription IEP HCCA
BP GO:0045934 negative regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0046854 phosphatidylinositol phosphate biosynthetic process IEP HCCA
BP GO:0048358 mucilage pectin biosynthetic process IEP HCCA
BP GO:0048363 mucilage pectin metabolic process IEP HCCA
BP GO:0048367 shoot system development IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0048731 system development IEP HCCA
BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA
BP GO:0051253 negative regulation of RNA metabolic process IEP HCCA
MF GO:0052742 phosphatidylinositol kinase activity IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
CC GO:0070161 anchoring junction IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:0090567 reproductive shoot system development IEP HCCA
BP GO:1902679 negative regulation of RNA biosynthetic process IEP HCCA
BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA
BP GO:1903507 negative regulation of nucleic acid-templated transcription IEP HCCA
InterPro domains Description Start Stop
IPR000313 PWWP_dom 23 108
No external refs found!