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  5. AT2G47440

AT2G47440


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG0001585 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001585_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G47440
Cluster HCCA: Cluster_106

Target Alias Description ECC score Gene Family Method Actions
Aev_g01509 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21471 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g25238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g12121 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15783 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10727 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene10830.t1 Aspi01Gene10830 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene25199.t1 Aspi01Gene25199 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene33036.t1 Aspi01Gene33036 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72530.t1 Aspi01Gene72530 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0803.g087553 No alias not classified & original description: CDS=593-2560 0.04 OrthoFinder output from all 47 species
Cba_g02646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.04G037300.1 Ceric.04G037300 not classified & original description: pacid=50632196... 0.07 OrthoFinder output from all 47 species
Ceric.05G060400.1 Ceric.05G060400 not classified & original description: pacid=50579138... 0.03 OrthoFinder output from all 47 species
Ceric.07G091800.1 Ceric.07G091800 not classified & original description: pacid=50627264... 0.06 OrthoFinder output from all 47 species
Ceric.12G062700.1 Ceric.12G062700 not classified & original description: pacid=50600807... 0.04 OrthoFinder output from all 47 species
Ceric.32G043600.1 Ceric.32G043600 not classified & original description: pacid=50597338... 0.05 OrthoFinder output from all 47 species
Dac_g01628 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07139 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g35494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g38173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15467 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_38343 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g19200.1 LOC_Os03g19200 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g49000.1 LOC_Os07g49000 no hits & (original description: none) 0.11 OrthoFinder output from all 47 species
Len_g16441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g08052 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_39821g0010 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Msp_g03965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g08853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01137 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Nbi_g01218 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g36538 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41238 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11323 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g10571 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g15750 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g61556 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000162 No alias not classified & original description: CDS=48-2129 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0036.g011541 No alias not classified & original description: CDS=1-1935 0.07 OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013323 No alias not classified & original description: CDS=84-1640 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s3471.g028815 No alias not classified & original description: CDS=84-1640 0.03 OrthoFinder output from all 47 species
Spa_g07917 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22236 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g29250 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g07040 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g09885 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Zm00001e035928_P001 Zm00001e035928 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e038347_P001 Zm00001e038347 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006457 protein folding ISS Interproscan
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Type GO Term Name Evidence Source
BP GO:0001558 regulation of cell growth IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004675 transmembrane receptor protein serine/threonine kinase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0005199 structural constituent of cell wall IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
CC GO:0005773 vacuole IEP HCCA
CC GO:0005874 microtubule IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0007020 microtubule nucleation IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0009410 response to xenobiotic stimulus IEP HCCA
CC GO:0009505 plant-type cell wall IEP HCCA
BP GO:0009741 response to brassinosteroid IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010583 response to cyclopentenone IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0019199 transmembrane receptor protein kinase activity IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
BP GO:0022604 regulation of cell morphogenesis IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
BP GO:0046777 protein autophosphorylation IEP HCCA
BP GO:0048638 regulation of developmental growth IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051510 regulation of unidimensional cell growth IEP HCCA
BP GO:0051513 regulation of monopolar cell growth IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!