AT2G47070 (SPL1)

Aliases : SPL1

Description : squamosa promoter binding protein-like 1

Gene families : OG0001309 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001309_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G47070

Target	Alias	Description	ECC score	Gene Family Method
Adi_g025056	SPL12	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene34071.t1	SPL1R2, ATSPL14,...	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g14626	SPL1	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
GSVIVT01013452001	SPL1R2, ATSPL14,...	RNA biosynthesis.transcriptional activation.SBP...	0.04	OrthoFinder output from all 47 species
GSVIVT01017678001	SPL1	RNA biosynthesis.transcriptional activation.SBP...	0.05	OrthoFinder output from all 47 species
Gb_37539	SPL1R2, ATSPL14,...	transcription factor (SBP)	0.07	OrthoFinder output from all 47 species
Gb_41517	No alias	transcription factor (SBP)	0.07	OrthoFinder output from all 47 species
LOC_Os01g18850.1	SPL1, LOC_Os01g18850	transcription factor (SBP)	0.03	OrthoFinder output from all 47 species
Msp_g13600	SPL1R2, ATSPL14,...	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g02473	SPL1R2, ATSPL14,...	SBP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g36989	SPL1R2, ATSPL14,...	SBP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Solyc01g068100.4.1	SPL1, Solyc01g068100	Squamosa promoter-binding-like protein 1 OS=Arabidopsis...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISS	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032879	regulation of localization	None	Extended
BP	GO:0032880	regulation of protein localization	RCA	Interproscan
BP	GO:0042743	hydrogen peroxide metabolic process	None	Extended
BP	GO:0042744	hydrogen peroxide catabolic process	RCA	Interproscan
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0060341	regulation of cellular localization	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0072593	reactive oxygen species metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004333	SBP_dom	106	179

External Links

No external refs found!

AT2G47070 (SPL1)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation