AT2G46810

Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein

Gene families : OG0000768 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000768_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G46810
Cluster	HCCA: Cluster_131

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00272070	FMA,...	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
AMTR_s00008p00198780	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AMTR_s00089p00043950	FMA,...	RNA biosynthesis.transcriptional activation.bHLH...	0.03	OrthoFinder output from all 47 species
AT1G22490	No alias	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	0.04	OrthoFinder output from all 47 species
Aev_g10535	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g10924	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g21755	FMA	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g03090	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07138	FMA	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Als_g10378	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g09821	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene29143.t1	FMA, Aspi01Gene29143	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene53774.t1	SPCH, Aspi01Gene53774	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene60129.t1	FMA, Aspi01Gene60129	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0007.g010552	FMA	bHLH-type transcription factor & original description: CDS=1-1698	0.06	OrthoFinder output from all 47 species
Cba_g00995	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Cba_g06394	FMA	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Cba_g25240	FMA	bHLH-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.18G037700.1	Ceric.18G037700	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.21G040300.1	Ceric.21G040300	bHLH-type transcription factor & original description:...	0.07	OrthoFinder output from all 47 species
Ceric.23G002400.1	FMA, Ceric.23G002400	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.26G015300.1	Ceric.26G015300	bHLH-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Dcu_g17824	FMA	bHLH-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ehy_g10264	FMA	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01021074001	FMA	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
GSVIVT01027446001	No alias	RNA biosynthesis.transcriptional activation.bHLH...	0.04	OrthoFinder output from all 47 species
Gb_17233	FMA	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
LOC_Os03g03000.1	LOC_Os03g03000	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
LOC_Os04g50090.1	LOC_Os04g50090	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
LOC_Os09g29360.1	LOC_Os09g29360	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
MA_194157g0010	No alias	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
MA_686524g0010	FMA	transcription factor (bHLH)	0.06	OrthoFinder output from all 47 species
Msp_g31314	FMA	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g15543	FMA	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g63342	FMA	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012172	FMA	bHLH-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0046.g013314	FMA	bHLH-type transcription factor & original description: CDS=1-1482	0.03	OrthoFinder output from all 47 species
Sam_g07999	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Sam_g28288	No alias	bHLH-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Solyc01g080050.4.1	MUTE, Solyc01g080050	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Solyc12g087850.3.1	Solyc12g087850	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species
Spa_g47856	FMA	bHLH-type transcription factor & original description: none	0.06	OrthoFinder output from all 47 species
Zm00001e000161_P002	Zm00001e000161	transcription factor (bHLH)	0.05	OrthoFinder output from all 47 species
Zm00001e000657_P002	Zm00001e000657	transcription factor (bHLH)	0.04	OrthoFinder output from all 47 species
Zm00001e015494_P002	Zm00001e015494	transcription factor (bHLH)	0.02	OrthoFinder output from all 47 species
Zm00001e026643_P001	FMA, Zm00001e026643	transcription factor (bHLH)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001558	regulation of cell growth	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
MF	GO:0008017	microtubule binding	IEP	HCCA
MF	GO:0008092	cytoskeletal protein binding	IEP	HCCA
BP	GO:0009690	cytokinin metabolic process	IEP	HCCA
BP	GO:0009908	flower development	IEP	HCCA
BP	GO:0010769	regulation of cell morphogenesis involved in differentiation	IEP	HCCA
MF	GO:0015631	tubulin binding	IEP	HCCA
BP	GO:0022603	regulation of anatomical structure morphogenesis	IEP	HCCA
BP	GO:0022604	regulation of cell morphogenesis	IEP	HCCA
BP	GO:0032502	developmental process	IEP	HCCA
BP	GO:0048366	leaf development	IEP	HCCA
BP	GO:0048367	shoot system development	IEP	HCCA
BP	GO:0048608	reproductive structure development	IEP	HCCA
BP	GO:0048731	system development	IEP	HCCA
BP	GO:0051510	regulation of unidimensional cell growth	IEP	HCCA
BP	GO:0080092	regulation of pollen tube growth	IEP	HCCA
BP	GO:0090567	reproductive shoot system development	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011598	bHLH_dom	191	241

External Links

No external refs found!

AT2G46810

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation