AT2G45680

Description : TCP family transcription factor

Gene families : OG0000443 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000443_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G45680

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00069p00171910	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.TCP...	0.06	OrthoFinder output from all 47 species
AT1G35560	No alias	TCP family transcription factor	0.04	OrthoFinder output from all 47 species
AT3G27010	AT-TCP20, TCP20,...	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family...	0.04	OrthoFinder output from all 47 species
AT5G08330	No alias	TCP family transcription factor	0.09	OrthoFinder output from all 47 species
Adi_g007407	AT-TCP20, TCP20,...	circAdian clock activation factor *(TCP20) & original...	0.02	OrthoFinder output from all 47 species
Adi_g055980	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g059260	No alias	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g060147	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g074351	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g088075	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g115586	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g06733	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g14354	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene06134.t1	AtTCP14, TCP14,...	TCP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Aspi01Gene42326.t1	AtTCP14, TCP14,...	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0013.g013244	No alias	TCP-type transcription factor & original description: CDS=1-1674	0.04	OrthoFinder output from all 47 species
Cba_g15454	No alias	TCP-type transcription factor & original description: none	0.1	OrthoFinder output from all 47 species
Ceric.12G053600.1	AtTCP14, TCP14,...	TCP-type transcription factor & original description:...	0.06	OrthoFinder output from all 47 species
Dcu_g07512	AT-TCP20, TCP20,...	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g19331	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Dde_g01691	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g09171	No alias	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g26686	AT-TCP20, TCP20,...	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
LOC_Os01g69980.1	AT-TCP20, TCP20,...	transcription factor (TCP). TCP20 circadian clock...	0.03	OrthoFinder output from all 47 species
LOC_Os02g51280.1	LOC_Os02g51280	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
LOC_Os08g43160.1	LOC_Os08g43160	transcription factor (TCP)	0.08	OrthoFinder output from all 47 species
LOC_Os09g34950.1	LOC_Os09g34950	transcription factor (TCP)	0.03	OrthoFinder output from all 47 species
LOC_Os11g07460.1	LOC_Os11g07460	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species
LOC_Os12g07480.1	LOC_Os12g07480	transcription factor (TCP)	0.02	OrthoFinder output from all 47 species
Len_g58006	No alias	TCP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
MA_81710g0010	No alias	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species
Msp_g35770	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g24235	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Ore_g03168	No alias	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ore_g07074	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pir_g50317	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.05	OrthoFinder output from all 47 species
Pnu_g23602	No alias	TCP-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Pnu_g27632	AtTCP14, TCP14	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g27780	No alias	TCP-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g03941	No alias	TCP-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g013125	AtTCP14, TCP14	TCP-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Smo404061	No alias	RNA biosynthesis.transcriptional activation.TCP...	0.05	OrthoFinder output from all 47 species
Solyc04g009180.3.1	Solyc04g009180	transcription factor (TCP). CHE circadian clock repression factor	0.04	OrthoFinder output from all 47 species
Solyc11g020670.1.1	Solyc11g020670	transcription factor (TCP)	0.07	OrthoFinder output from all 47 species
Zm00001e003744_P001	Zm00001e003744	transcription factor (TCP)	0.04	OrthoFinder output from all 47 species
Zm00001e016271_P001	Zm00001e016271	transcription factor (TCP). CHE circadian clock repression factor	0.06	OrthoFinder output from all 47 species
Zm00001e023066_P001	Zm00001e023066	transcription factor (TCP). CHE circadian clock repression factor	0.1	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008361	regulation of cell size	IGI	Interproscan
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032502	developmental process	None	Extended
BP	GO:0032535	regulation of cellular component size	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0048364	root development	IMP	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050793	regulation of developmental process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051093	negative regulation of developmental process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065008	regulation of biological quality	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090066	regulation of anatomical structure size	None	Extended
BP	GO:0099402	plant organ development	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1900055	regulation of leaf senescence	None	Extended
BP	GO:1900056	negative regulation of leaf senescence	IGI	Interproscan
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR017887	TF_TCP_subgr	74	154

External Links

No external refs found!

AT2G45680

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation