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AT2G43600


Description : Chitinase family protein


Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43600

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00243780 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.03 OrthoFinder output from all 47 species
AT2G43570 CHI chitinase, putative 0.04 OrthoFinder output from all 47 species
AT2G43620 No alias Chitinase family protein 0.04 OrthoFinder output from all 47 species
AT3G54420 ATEP3, EP3,... homolog of carrot EP3-3 chitinase 0.04 OrthoFinder output from all 47 species
Aev_g02874 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06392 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g26045 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35616 HCHIB, B-CHI,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40428 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35678 ATEP3, EP3,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32113.t1 ATEP3, EP3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000746 ATEP3, EP3,... not classified & original description: CDS=491-1327 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000750 ATEP3, EP3,... not classified & original description: CDS=1-942 0.02 OrthoFinder output from all 47 species
Dcu_g19889 ATEP3, EP3,... not classified & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01004381001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01038120001 ATEP3, EP3,... Endochitinase EP3 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_07463 No alias Chitinase 4 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Gb_29992 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_29993 No alias Chitinase 5 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_34557 No alias Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
Gb_34558 ATEP3, EP3,... Chitinase 6 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41620.1 ATEP3, EP3,... Chitinase 4 OS=Oryza sativa subsp. japonica... 0.04 OrthoFinder output from all 47 species
LOC_Os04g41680.1 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
Len_g47568 HCHIB, B-CHI,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_448160g0010 ATEP3, EP3,... Chitinase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species
MA_530083g0010 HCHIB, B-CHI,... no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_741127g0010 No alias Endochitinase At2g43610 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_80085g0010 HCHIB, B-CHI,... Basic endochitinase C OS=Secale cereale... 0.03 OrthoFinder output from all 47 species
Smo428512 No alias No description available 0.03 OrthoFinder output from all 47 species
Smo446851 HCHIB, B-CHI,... Endochitinase A2 OS=Pisum sativum 0.02 OrthoFinder output from all 47 species
Solyc10g055810.2.1 HCHIB, B-CHI,... Basic 30 kDa endochitinase OS=Solanum lycopersicum... 0.03 OrthoFinder output from all 47 species
Solyc10g074390.1.1 HCHIB, B-CHI,... Endochitinase A OS=Nicotiana tabacum... 0.04 OrthoFinder output from all 47 species
Zm00001e027534_P001 Zm00001e027534 Chitinase 10 OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEP HCCA
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140678 molecular function inhibitor activity IEP HCCA
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 227 273
IPR000726 Glyco_hydro_19_cat 83 220
No external refs found!