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  5. AT2G43290

AT2G43290 (MSS3)


Aliases : MSS3

Description : Calcium-binding EF-hand family protein


Gene families : OG0000205 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000205_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G43290

Target Alias Description ECC score Gene Family Method Actions
AT4G03290 No alias EF hand calcium-binding protein family 0.06 OrthoFinder output from all 47 species
AT4G12860 UNE14 EF hand calcium-binding protein family 0.03 OrthoFinder output from all 47 species
AT5G44460 CML43 calmodulin like 43 0.04 OrthoFinder output from all 47 species
Aev_g05860 UNE14 calcium sensor *(CML) & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g09654 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g12844 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20328 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g37168 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g04699 CML42 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g05225 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g27813 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47923 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g03940 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13274 CML42 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g14961 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g31301 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g36467 UNE14 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g39505 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05105 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g12298 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene28477.t1 UNE14, Aspi01Gene28477 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34632.t1 CML42, Aspi01Gene34632 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34640.t1 CML42, Aspi01Gene34640 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34652.t1 CML42, Aspi01Gene34652 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34656.t1 UNE14, Aspi01Gene34656 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34662.t1 CML42, Aspi01Gene34662 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40818.t1 UNE14, Aspi01Gene40818 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68777.t1 CML23, Aspi01Gene68777 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68790.t1 CML23, Aspi01Gene68790 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0367.g066979 UNE14 calcium sensor *(CML) & original description: CDS=1-1074 0.03 OrthoFinder output from all 47 species
Cba_g08104 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15896 AGD11 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37531 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g42977 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G059500.1 Ceric.11G059500 calcium sensor *(CML) & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.17G067000.1 Ceric.17G067000 not classified & original description: pacid=50618804... 0.03 OrthoFinder output from all 47 species
Dac_g12031 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g02262 CML42 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g11700 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22617 CML43 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Dcu_g41575 UNE14 calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Dde_g06167 CML42 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g00480 No alias calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g11295 CML39, CML37 calcium sensor *(CML) & original description: none 0.06 OrthoFinder output from all 47 species
Ehy_g16822 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19176 CML42 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g24054 CML42 not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01015585001 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Gb_28443 UNE14 Calmodulin-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Gb_30819 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os02g39380.1 AGD11, LOC_Os02g39380 Probable calcium-binding protein CML17 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os03g21380.2 CML42, LOC_Os03g21380 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.05 OrthoFinder output from all 47 species
LOC_Os06g07560.1 UNE14, LOC_Os06g07560 Probable calcium-binding protein CML30 OS=Oryza sativa... 0.06 OrthoFinder output from all 47 species
LOC_Os09g24580.1 LOC_Os09g24580 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g04938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g23777 CML42 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g29583 ATCML9, CAM9, CML9 not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_103558g0010 UNE14 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_10431273g0010 CML41 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_18054g0010 CML43 Probable calcium-binding protein CML32 OS=Oryza sativa... 0.04 OrthoFinder output from all 47 species
MA_224196g0010 CML42 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
MA_7799814g0010 CML41 Calcium-binding protein CML42 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Mp6g10070.1 UNE14 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g20470.1 UNE14 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Msp_g42557 AGD11 calcium sensor *(CML) & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g14760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g08284 UNE14 calcium sensor *(CML) & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g21574 CML42 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09124 UNE14 calcium sensor *(CML) & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g03755 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g17420 No alias calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g150132.1.1 AGD11, Solyc06g150132 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc07g007950.1.1 AGD11, Solyc07g007950 Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Solyc09g055880.1.1 AGD11, Solyc09g055880 Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g074740.2.1 CML42, Solyc10g074740 Calcium-binding protein CAST OS=Solanum tuberosum... 0.05 OrthoFinder output from all 47 species
Spa_g16164 CML42 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g33279 UNE14 calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47923 CML42 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g51233 UNE14 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001557_P001 CML42, Zm00001e001557 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e007722_P001 AGD11, Zm00001e007722 Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species
Zm00001e038252_P001 CML43, Zm00001e038252 Probable calcium-binding protein CML27 OS=Oryza sativa... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005576 extracellular region ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000302 response to reactive oxygen species IEP HCCA
BP GO:0002376 immune system process IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006955 immune response IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0009266 response to temperature stimulus IEP HCCA
BP GO:0009408 response to heat IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0009612 response to mechanical stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009648 photoperiodism IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009737 response to abscisic acid IEP HCCA
BP GO:0009909 regulation of flower development IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0010286 heat acclimation IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0042542 response to hydrogen peroxide IEP HCCA
BP GO:0045087 innate immune response IEP HCCA
BP GO:0048571 long-day photoperiodism IEP HCCA
BP GO:0048573 photoperiodism, flowering IEP HCCA
BP GO:0048574 long-day photoperiodism, flowering IEP HCCA
BP GO:0048831 regulation of shoot system development IEP HCCA
BP GO:0051592 response to calcium ion IEP HCCA
BP GO:0080164 regulation of nitric oxide metabolic process IEP HCCA
BP GO:0097305 response to alcohol IEP HCCA
BP GO:2000241 regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 65 126
IPR002048 EF_hand_dom 141 207
No external refs found!