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  5. AT2G42975

AT2G42975


Description : unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast thylakoid membrane, chloroplast; Has 32 Blast hits to 32 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).


Gene families : OG0008133 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008133_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42975

Target Alias Description ECC score Gene Family Method Actions
Adi_g013702 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g053284 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15843 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g06048 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10212.t1 Aspi01Gene10212 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G101700.1 Ceric.02G101700 not classified & original description: pacid=50584237... 0.11 OrthoFinder output from all 47 species
Dac_g13306 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01020847001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os01g47630.1 LOC_Os01g47630 no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Len_g29806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06433 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g09261 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g39092 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19435 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g11035 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g056240.3.1 Solyc07g056240 no hits & (original description: none) 0.07 OrthoFinder output from all 47 species
Zm00001e020220_P001 Zm00001e020220 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0009507 chloroplast IDA Interproscan
CC GO:0009535 chloroplast thylakoid membrane IDA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0001763 morphogenesis of a branching structure IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0005452 solute:inorganic anion antiporter activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
CC GO:0005884 actin filament IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006544 glycine metabolic process IEP HCCA
BP GO:0006546 glycine catabolic process IEP HCCA
BP GO:0006636 unsaturated fatty acid biosynthetic process IEP HCCA
BP GO:0006720 isoprenoid metabolic process IEP HCCA
BP GO:0006721 terpenoid metabolic process IEP HCCA
BP GO:0006733 obsolete oxidoreduction coenzyme metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006817 phosphate ion transport IEP HCCA
BP GO:0007623 circadian rhythm IEP HCCA
MF GO:0008028 monocarboxylic acid transmembrane transporter activity IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0008299 isoprenoid biosynthetic process IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009069 serine family amino acid metabolic process IEP HCCA
BP GO:0009071 serine family amino acid catabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009106 lipoate metabolic process IEP HCCA
BP GO:0009108 obsolete coenzyme biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
CC GO:0009526 plastid envelope IEP HCCA
CC GO:0009534 chloroplast thylakoid IEP HCCA
BP GO:0009556 microsporogenesis IEP HCCA
CC GO:0009579 thylakoid IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0009637 response to blue light IEP HCCA
BP GO:0009639 response to red or far red light IEP HCCA
BP GO:0009641 shade avoidance IEP HCCA
BP GO:0009642 response to light intensity IEP HCCA
BP GO:0009644 response to high light intensity IEP HCCA
BP GO:0009657 plastid organization IEP HCCA
BP GO:0009658 chloroplast organization IEP HCCA
MF GO:0009673 low-affinity phosphate transmembrane transporter activity IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009743 response to carbohydrate IEP HCCA
BP GO:0009744 response to sucrose IEP HCCA
BP GO:0009767 photosynthetic electron transport chain IEP HCCA
BP GO:0009773 photosynthetic electron transport in photosystem I IEP HCCA
BP GO:0009891 positive regulation of biosynthetic process IEP HCCA
BP GO:0009893 positive regulation of metabolic process IEP HCCA
CC GO:0009941 chloroplast envelope IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010019 chloroplast-nucleus signaling pathway IEP HCCA
BP GO:0010114 response to red light IEP HCCA
BP GO:0010117 photoprotection IEP HCCA
BP GO:0010155 regulation of proton transport IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0010218 response to far red light IEP HCCA
BP GO:0010223 secondary shoot formation IEP HCCA
BP GO:0010264 myo-inositol hexakisphosphate biosynthetic process IEP HCCA
CC GO:0010287 plastoglobule IEP HCCA
CC GO:0010319 stromule IEP HCCA
BP GO:0010346 shoot axis formation IEP HCCA
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0010604 positive regulation of macromolecule metabolic process IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015114 phosphate ion transmembrane transporter activity IEP HCCA
MF GO:0015120 phosphoglycerate transmembrane transporter activity IEP HCCA
MF GO:0015121 phosphoenolpyruvate:phosphate antiporter activity IEP HCCA
MF GO:0015315 organophosphate:inorganic phosphate antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015355 secondary active monocarboxylate transmembrane transporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015713 phosphoglycerate transmembrane transport IEP HCCA
BP GO:0015714 phosphoenolpyruvate transport IEP HCCA
BP GO:0015718 monocarboxylic acid transport IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015995 chlorophyll biosynthetic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016108 tetraterpenoid metabolic process IEP HCCA
BP GO:0016109 tetraterpenoid biosynthetic process IEP HCCA
BP GO:0016114 terpenoid biosynthetic process IEP HCCA
BP GO:0016116 carotenoid metabolic process IEP HCCA
BP GO:0016117 carotenoid biosynthetic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019216 regulation of lipid metabolic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0031304 obsolete intrinsic component of mitochondrial inner membrane IEP HCCA
BP GO:0031325 positive regulation of cellular metabolic process IEP HCCA
BP GO:0031328 positive regulation of cellular biosynthetic process IEP HCCA
BP GO:0031407 oxylipin metabolic process IEP HCCA
BP GO:0031408 oxylipin biosynthetic process IEP HCCA
CC GO:0031967 organelle envelope IEP HCCA
CC GO:0031975 envelope IEP HCCA
CC GO:0031976 plastid thylakoid IEP HCCA
MF GO:0032440 2-alkenal reductase [NAD(P)+] activity IEP HCCA
BP GO:0032879 regulation of localization IEP HCCA
BP GO:0032958 inositol phosphate biosynthetic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033517 myo-inositol hexakisphosphate metabolic process IEP HCCA
BP GO:0033559 unsaturated fatty acid metabolic process IEP HCCA
BP GO:0034285 response to disaccharide IEP HCCA
BP GO:0034293 sexual sporulation IEP HCCA
BP GO:0034762 regulation of transmembrane transport IEP HCCA
BP GO:0034765 regulation of monoatomic ion transmembrane transport IEP HCCA
MF GO:0035671 enone reductase activity IEP HCCA
MF GO:0035798 2-alkenal reductase (NADP+) activity IEP HCCA
BP GO:0042440 pigment metabolic process IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0042873 aldonate transmembrane transport IEP HCCA
MF GO:0042879 aldonate transmembrane transporter activity IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043269 regulation of monoatomic ion transport IEP HCCA
BP GO:0043647 inositol phosphate metabolic process IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0043934 sporulation IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0045893 positive regulation of DNA-templated transcription IEP HCCA
BP GO:0045935 positive regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0046148 pigment biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
BP GO:0046173 polyol biosynthetic process IEP HCCA
BP GO:0046283 anthocyanin-containing compound metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048236 plant-type sporogenesis IEP HCCA
BP GO:0048511 rhythmic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0048522 positive regulation of cellular process IEP HCCA
BP GO:0048653 anther development IEP HCCA
BP GO:0051017 actin filament bundle assembly IEP HCCA
BP GO:0051049 regulation of transport IEP HCCA
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051254 positive regulation of RNA metabolic process IEP HCCA
BP GO:0051321 meiotic cell cycle IEP HCCA
BP GO:0052386 cell wall thickening IEP HCCA
BP GO:0052543 callose deposition in cell wall IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
BP GO:0061572 actin filament bundle organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0071214 cellular response to abiotic stimulus IEP HCCA
BP GO:0071478 cellular response to radiation IEP HCCA
BP GO:0071482 cellular response to light stimulus IEP HCCA
BP GO:0071484 cellular response to light intensity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0089721 phosphoenolpyruvate transmembrane transporter activity IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
CC GO:0099080 supramolecular complex IEP HCCA
CC GO:0099081 supramolecular polymer IEP HCCA
CC GO:0099512 supramolecular fiber IEP HCCA
CC GO:0099513 polymeric cytoskeletal fiber IEP HCCA
BP GO:0104004 cellular response to environmental stimulus IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
BP GO:1901605 alpha-amino acid metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1902680 positive regulation of RNA biosynthetic process IEP HCCA
BP GO:1903508 positive regulation of nucleic acid-templated transcription IEP HCCA
BP GO:1904062 regulation of monoatomic cation transmembrane transport IEP HCCA

No InterPro domains available for this sequence

No external refs found!