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AT2G42100


Description : Actin-like ATPase superfamily protein


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G42100
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
Adi_g007881 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene49248.t1 ACT7, Aspi01Gene49248 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0040.g026666 ACT7 actin filament protein & original description: CDS=31-1164 0.04 OrthoFinder output from all 47 species
Cba_g37063 ACT7 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05245 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Gb_34329 AAc1, ACT1 actin filament protein 0.01 OrthoFinder output from all 47 species
LOC_Os10g36650.1 ACT7, LOC_Os10g36650 actin filament protein 0.04 OrthoFinder output from all 47 species
LOC_Os12g44350.1 ACT11, LOC_Os12g44350 actin filament protein 0.03 OrthoFinder output from all 47 species
Len_g29055 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
MA_96086g0010 ACT7 actin filament protein 0.03 OrthoFinder output from all 47 species
Pnu_g08918 ACT7 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g18686 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g32127 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g40371 No alias actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Solyc03g078400.3.1 ACT7, Solyc03g078400 actin filament protein 0.02 OrthoFinder output from all 47 species
Solyc04g071260.3.1 ACT11, Solyc04g071260 actin filament protein 0.05 OrthoFinder output from all 47 species
Solyc10g086460.2.1 ACT4, Solyc10g086460 actin filament protein 0.03 OrthoFinder output from all 47 species
Spa_g04152 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30232 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005200 structural constituent of cytoskeleton ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
CC GO:0015629 actin cytoskeleton ISS Interproscan
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Type GO Term Name Evidence Source
MF GO:0000156 phosphorelay response regulator activity IEP HCCA
MF GO:0003886 DNA (cytosine-5-)-methyltransferase activity IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0009008 DNA-methyltransferase activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0042991 obsolete transcription factor import into nucleus IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051645 Golgi localization IEP HCCA
BP GO:0051646 mitochondrion localization IEP HCCA
BP GO:0060151 peroxisome localization IEP HCCA
BP GO:0060688 regulation of morphogenesis of a branching structure IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000032 regulation of secondary shoot formation IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 6 378
No external refs found!