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Aliases : ACT9
Description : actin 9
Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AT2G42090 | |
| Cluster | HCCA: Cluster_105 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cba_g22713 | AAc1, ACT1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Gb_08812 | ACT7 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| Gb_34329 | AAc1, ACT1 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os03g61970.1 | ACT7, LOC_Os03g61970 | actin filament protein | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g23151 | ACT7 | actin filament protein & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g08918 | ACT7 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g078400.3.1 | ACT7, Solyc03g078400 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g071260.3.1 | ACT11, Solyc04g071260 | actin filament protein | 0.03 | OrthoFinder output from all 47 species | |
| Solyc10g086460.2.1 | ACT4, Solyc10g086460 | actin filament protein | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g13908 | ACT7 | acTin filament protein & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005200 | structural constituent of cytoskeleton | ISS | Interproscan |
| CC | GO:0005737 | cytoplasm | ISM | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| MF | GO:0005544 | calcium-dependent phospholipid binding | IEP | HCCA |
| BP | GO:0006511 | ubiquitin-dependent protein catabolic process | IEP | HCCA |
| MF | GO:0008146 | sulfotransferase activity | IEP | HCCA |
| MF | GO:0016782 | transferase activity, transferring sulphur-containing groups | IEP | HCCA |
| CC | GO:0019005 | SCF ubiquitin ligase complex | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| BP | GO:0019941 | modification-dependent protein catabolic process | IEP | HCCA |
| BP | GO:0043632 | modification-dependent macromolecule catabolic process | IEP | HCCA |
| BP | GO:0051603 | proteolysis involved in protein catabolic process | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| MF | GO:1990135 | flavonoid sulfotransferase activity | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004000 | Actin | 2 | 365 |
| No external refs found! |