1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT2G41090

AT2G41090


Description : Calcium-binding EF-hand family protein


Gene families : OG0000295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000295_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G41090
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00269730 CAM3, acam-3,... Calmodulin-like protein 8 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Aop_g12853 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene10403.t1 CAM3, acam-3,... calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os12g41110.1 ACAM-6, CAM6,... Calmodulin-like protein 5 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Len_g22413 CAM3, acam-3 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
MA_52889g0010 CAM3, acam-3 Calmodulin-related protein OS=Petunia hybrida... 0.03 OrthoFinder output from all 47 species
Ppi_g06643 ACAM-6, CAM6 calcium sensor *(CML) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38146 No alias calcium sensor *(CML) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding ISS Interproscan
CC GO:0005886 plasma membrane ISM Interproscan
BP GO:0009612 response to mechanical stimulus RCA Interproscan
BP GO:0019722 calcium-mediated signaling RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000165 MAPK cascade IEP HCCA
BP GO:0002682 regulation of immune system process IEP HCCA
BP GO:0002831 regulation of response to biotic stimulus IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006884 cell volume homeostasis IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
BP GO:0006995 cellular response to nitrogen starvation IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008219 cell death IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
CC GO:0009528 plastid inner membrane IEP HCCA
BP GO:0009595 detection of biotic stimulus IEP HCCA
BP GO:0009607 response to biotic stimulus IEP HCCA
BP GO:0009615 response to virus IEP HCCA
BP GO:0009617 response to bacterium IEP HCCA
BP GO:0009620 response to fungus IEP HCCA
BP GO:0009627 systemic acquired resistance IEP HCCA
BP GO:0009696 salicylic acid metabolic process IEP HCCA
BP GO:0009697 salicylic acid biosynthetic process IEP HCCA
CC GO:0009706 chloroplast inner membrane IEP HCCA
BP GO:0009718 anthocyanin-containing compound biosynthetic process IEP HCCA
BP GO:0009751 response to salicylic acid IEP HCCA
BP GO:0009755 hormone-mediated signaling pathway IEP HCCA
BP GO:0009862 systemic acquired resistance, salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009863 salicylic acid mediated signaling pathway IEP HCCA
BP GO:0009867 jasmonic acid mediated signaling pathway IEP HCCA
BP GO:0009992 cellular water homeostasis IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010310 regulation of hydrogen peroxide metabolic process IEP HCCA
BP GO:0010363 regulation of plant-type hypersensitive response IEP HCCA
BP GO:0010941 regulation of cell death IEP HCCA
BP GO:0014070 response to organic cyclic compound IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
BP GO:0018958 phenol-containing compound metabolic process IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019725 cellular homeostasis IEP HCCA
BP GO:0030104 water homeostasis IEP HCCA
MF GO:0030551 cyclic nucleotide binding IEP HCCA
BP GO:0030643 cellular phosphate ion homeostasis IEP HCCA
BP GO:0031347 regulation of defense response IEP HCCA
BP GO:0031348 negative regulation of defense response IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0042537 benzene-containing compound metabolic process IEP HCCA
BP GO:0042592 homeostatic process IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043067 regulation of programmed cell death IEP HCCA
BP GO:0043069 negative regulation of programmed cell death IEP HCCA
BP GO:0043207 response to external biotic stimulus IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0043562 cellular response to nitrogen levels IEP HCCA
BP GO:0043900 obsolete regulation of multi-organism process IEP HCCA
BP GO:0043903 regulation of biological process involved in symbiotic interaction IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0044419 biological process involved in interspecies interaction between organisms IEP HCCA
BP GO:0045088 regulation of innate immune response IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046189 phenol-containing compound biosynthetic process IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
BP GO:0046713 borate transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
BP GO:0048523 negative regulation of cellular process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0048585 negative regulation of response to stimulus IEP HCCA
BP GO:0048878 chemical homeostasis IEP HCCA
BP GO:0050776 regulation of immune response IEP HCCA
BP GO:0050832 defense response to fungus IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0051707 response to other organism IEP HCCA
BP GO:0055062 phosphate ion homeostasis IEP HCCA
BP GO:0055082 cellular chemical homeostasis IEP HCCA
BP GO:0060548 negative regulation of cell death IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
BP GO:1900055 regulation of leaf senescence IEP HCCA
BP GO:1900056 negative regulation of leaf senescence IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
BP GO:1901700 response to oxygen-containing compound IEP HCCA
BP GO:2000377 regulation of reactive oxygen species metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 81 143
IPR002048 EF_hand_dom 13 73
No external refs found!