AT2G40590


Description : Ribosomal protein S26e family protein


Gene families : OG0001368 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001368_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G40590

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00077p00042770 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Aev_g07493 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Als_g18342 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g30554 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Aop_g31638 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g34888 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aop_g67998 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Aspi01Gene44797.t1 Aspi01Gene44797 component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0008.g011486 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0038.g026316 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cba_g20558 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.21G032100.1 Ceric.21G032100 component *(eS26) of small ribosomal-subunit (SSU)... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001486.9 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.1 OrthoFinder output from all 47 species
Cre16.g682300 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.13 OrthoFinder output from all 47 species
Dac_g16013 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dac_g27155 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Dac_g33608 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Dcu_g00870 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Dcu_g02248 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Ehy_g01928 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ehy_g13993 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
GSVIVT01024576001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.07 OrthoFinder output from all 47 species
GSVIVT01032696001 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 OrthoFinder output from all 47 species
Gb_00995 No alias component RPS26 of SSU proteome 0.07 OrthoFinder output from all 47 species
Gb_00996 No alias component RPS26 of SSU proteome 0.03 OrthoFinder output from all 47 species
LOC_Os01g60790.1 LOC_Os01g60790 component RPS26 of SSU proteome 0.08 OrthoFinder output from all 47 species
LOC_Os05g39960.1 LOC_Os05g39960 component RPS26 of SSU proteome 0.14 OrthoFinder output from all 47 species
Len_g00840 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Len_g02472 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Lfl_g15449 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
MA_114136g0010 No alias component RPS26 of SSU proteome 0.06 OrthoFinder output from all 47 species
MA_74546g0010 No alias component RPS26 of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp2g06210.1 No alias component RPS26 of SSU proteome 0.07 OrthoFinder output from all 47 species
Msp_g40775 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Nbi_g20040 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pir_g09911 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c16_9210V3.1 Pp3c16_9210 Ribosomal protein S26e family protein 0.11 OrthoFinder output from all 47 species
Pp3c5_16070V3.1 Pp3c5_16070 Ribosomal protein S26e family protein 0.05 OrthoFinder output from all 47 species
Pp3c6_8910V3.1 Pp3c6_8910 Ribosomal protein S26e family protein 0.06 OrthoFinder output from all 47 species
Ppi_g00321 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ppi_g34120 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014966 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g05476 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g15700 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Sam_g20299 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Sam_g47002 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.09 OrthoFinder output from all 47 species
Smo77589 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Solyc04g008810.3.1 Solyc04g008810 component RPS26 of SSU proteome 0.17 OrthoFinder output from all 47 species
Solyc06g007470.3.1 Solyc06g007470 component RPS26 of SSU proteome 0.03 OrthoFinder output from all 47 species
Spa_g03106 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Spa_g25276 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Tin_g26404 No alias component *(eS26) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Zm00001e011780_P001 Zm00001e011780 component RPS26 of SSU proteome 0.17 OrthoFinder output from all 47 species
Zm00001e027298_P001 Zm00001e027298 component RPS26 of SSU proteome 0.18 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome ISS Interproscan
CC GO:0005737 cytoplasm ISM Interproscan
CC GO:0005840 ribosome ISS Interproscan
BP GO:0006412 translation ISS Interproscan
CC GO:0022627 cytosolic small ribosomal subunit IDA Interproscan
BP GO:0042254 ribosome biogenesis ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0004774 succinate-CoA ligase activity IEP HCCA
MF GO:0004776 succinate-CoA ligase (GDP-forming) activity IEP HCCA
CC GO:0005829 cytosol IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006626 protein targeting to mitochondrion IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
MF GO:0016878 acid-thiol ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0022603 regulation of anatomical structure morphogenesis IEP HCCA
CC GO:0022625 cytosolic large ribosomal subunit IEP HCCA
CC GO:0022626 cytosolic ribosome IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0035265 organ growth IEP HCCA
BP GO:0042127 regulation of cell population proliferation IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0060688 regulation of morphogenesis of a branching structure IEP HCCA
BP GO:0070585 protein localization to mitochondrion IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0072655 establishment of protein localization to mitochondrion IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0090506 axillary shoot meristem initiation IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1905428 regulation of plant organ formation IEP HCCA
BP GO:2000032 regulation of secondary shoot formation IEP HCCA
InterPro domains Description Start Stop
IPR000892 Ribosomal_S26e 1 106
No external refs found!