AT2G39250 (SNZ)

Aliases : SNZ

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G39250

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00035p00205430	AP2, FLO2, FL1,...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.03	OrthoFinder output from all 47 species
Aev_g04489	AIL5, EMK, CHO1	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aob_g17577	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Aop_g70119	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Aspi01Gene20073.t1	PLT2, Aspi01Gene20073	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Cba_g52321	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.05	OrthoFinder output from all 47 species
Dcu_g12320	PLT2	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g31669	ADAP	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
GSVIVT01025548001	RAP2.7, TOE1	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.06	OrthoFinder output from all 47 species
Gb_30123	AP2, FLO2, FL1	transcription factor (AP2)	0.06	OrthoFinder output from all 47 species
LOC_Os06g05340.1	LOC_Os06g05340	transcription factor (AP2). RAM1-dependent transcription...	0.02	OrthoFinder output from all 47 species
Lfl_g38472	AP2, FLO2, FL1	AP2-type transcription factor *(WRI/AIL) & original...	0.03	OrthoFinder output from all 47 species
MA_10434312g0010	TOE3	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
MA_133324g0010	AIL5, EMK, CHO1	no hits & (original description: none)	0.05	OrthoFinder output from all 47 species
MA_75070g0010	AP2, FLO2, FL1	transcription factor (AP2)	0.04	OrthoFinder output from all 47 species
Ore_g27835	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Ppi_g45371	No alias	AP2-type transcription factor *(WRI/AIL) & original...	0.02	OrthoFinder output from all 47 species
Zm00001e004083_P002	Zm00001e004083	transcription factor (AP2)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	TAS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	TAS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IDA	Interproscan
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005634	nucleus	TAS	Interproscan
CC	GO:0005730	nucleolus	IDA	Interproscan
BP	GO:0006355	regulation of DNA-templated transcription	TAS	Interproscan
BP	GO:0007275	multicellular organism development	ISS	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0008610	lipid biosynthetic process	IEP	HCCA
BP	GO:0008654	phospholipid biosynthetic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0045017	glycerolipid biosynthetic process	IEP	HCCA
BP	GO:0046474	glycerophospholipid biosynthetic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	107	156

External Links

No external refs found!

AT2G39250 (SNZ)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation