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  5. AT2G39050

AT2G39050


Description : hydroxyproline-rich glycoprotein family protein


Gene families : OG0000410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G39050

Target Alias Description ECC score Gene Family Method Actions
Ala_g34246 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g13208 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g01982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33850.t1 Aspi01Gene33850 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g08133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g23444 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.30G019500.1 Ceric.30G019500 not classified & original description: pacid=50608620... 0.03 OrthoFinder output from all 47 species
Dac_g38997 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g06498 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g01450.1 LOC_Os01g01450 Ricin B-like lectin R40C1 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
LOC_Os07g48460.1 LOC_Os07g48460 Ricin B-like lectin R40G2 OS=Oryza sativa subsp.... 0.07 OrthoFinder output from all 47 species
Len_g56736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25403 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g07091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g13693 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0062.g015570 No alias not classified & original description: CDS=1511-1843 0.03 OrthoFinder output from all 47 species
Sam_g17902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo437633 No alias Ricin B-like lectin R40G3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
Zm00001e035882_P001 Zm00001e035882 Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species
Zm00001e035883_P001 Zm00001e035883 Ricin B-like lectin R40G3 OS=Oryza sativa subsp.... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IDA Interproscan
CC GO:0005634 nucleus ISM Interproscan
CC GO:0005737 cytoplasm IDA Interproscan
BP GO:0008150 biological_process ND Interproscan
MF GO:0030246 carbohydrate binding IDA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000325 plant-type vacuole IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006623 protein targeting to vacuole IEP HCCA
BP GO:0006625 protein targeting to peroxisome IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006787 porphyrin-containing compound catabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006814 sodium ion transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006891 intra-Golgi vesicle-mediated transport IEP HCCA
BP GO:0007031 peroxisome organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0009268 response to pH IEP HCCA
BP GO:0009694 jasmonic acid metabolic process IEP HCCA
BP GO:0009695 jasmonic acid biosynthetic process IEP HCCA
BP GO:0010118 stomatal movement IEP HCCA
BP GO:0010119 regulation of stomatal movement IEP HCCA
BP GO:0010351 lithium ion transport IEP HCCA
BP GO:0015031 protein transport IEP HCCA
MF GO:0015081 sodium ion transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015385 sodium:proton antiporter activity IEP HCCA
BP GO:0015919 peroxisomal membrane transport IEP HCCA
BP GO:0015994 chlorophyll metabolic process IEP HCCA
BP GO:0015996 chlorophyll catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016558 protein import into peroxisome matrix IEP HCCA
BP GO:0019722 calcium-mediated signaling IEP HCCA
BP GO:0019932 second-messenger-mediated signaling IEP HCCA
BP GO:0033015 tetrapyrrole catabolic process IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0043574 peroxisomal transport IEP HCCA
BP GO:0044743 protein transmembrane import into intracellular organelle IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
BP GO:0046149 pigment catabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0048366 leaf development IEP HCCA
MF GO:0051139 metal cation:proton antiporter activity IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0055065 metal ion homeostasis IEP HCCA
BP GO:0055075 potassium ion homeostasis IEP HCCA
BP GO:0065002 intracellular protein transmembrane transport IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071806 protein transmembrane transport IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072662 protein localization to peroxisome IEP HCCA
BP GO:0072663 establishment of protein localization to peroxisome IEP HCCA
BP GO:0072665 protein localization to vacuole IEP HCCA
BP GO:0072666 establishment of protein localization to vacuole IEP HCCA
BP GO:0090333 regulation of stomatal closure IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140828 metal cation:monoatomic cation antiporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!